RNA–Protein interactions for RNA: ENST00000603230.1

AMBP-204, Transcript of alpha-1-microglobulin/bikunin precursor, humanhuman

TSL 1 (best)

Gene AMBP, Length 1,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBP-204ENST00000603230 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
AMBP-204ENST00000603230 CCDC180Q9P1Z9 1646 aa32.97■■■□□ 2.87
AMBP-204ENST00000603230 ABCC9O60706 1549 aa32.39■■■□□ 2.78
AMBP-204ENST00000603230 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
AMBP-204ENST00000603230 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
AMBP-204ENST00000603230 NACADO15069 1562 aa31.05■■■□□ 2.56
AMBP-204ENST00000603230 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
AMBP-204ENST00000603230 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
AMBP-204ENST00000603230 DCAF1Q9Y4B6 1507 aa30.66■■■□□ 2.5
AMBP-204ENST00000603230 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
AMBP-204ENST00000603230 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
AMBP-204ENST00000603230 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
AMBP-204ENST00000603230 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
AMBP-204ENST00000603230 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
AMBP-204ENST00000603230 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
AMBP-204ENST00000603230 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
AMBP-204ENST00000603230 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
AMBP-204ENST00000603230 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
AMBP-204ENST00000603230 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
AMBP-204ENST00000603230 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
AMBP-204ENST00000603230 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
AMBP-204ENST00000603230 NCAPD3P42695 1498 aa28.64■■■□□ 2.17
AMBP-204ENST00000603230 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
AMBP-204ENST00000603230 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
AMBP-204ENST00000603230 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
AMBP-204ENST00000603230 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
AMBP-204ENST00000603230 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
AMBP-204ENST00000603230 WIZO95785 1651 aa28.31■■■□□ 2.12
AMBP-204ENST00000603230 RSF1Q96T23 1441 aaPredicted RBP28.27■■■□□ 2.12
AMBP-204ENST00000603230 NESP48681 1621 aa28■■■□□ 2.07
AMBP-204ENST00000603230 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
AMBP-204ENST00000603230 ERCC6Q03468 1493 aa27.95■■■□□ 2.07
AMBP-204ENST00000603230 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
AMBP-204ENST00000603230 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
AMBP-204ENST00000603230 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
AMBP-204ENST00000603230 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
AMBP-204ENST00000603230 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
AMBP-204ENST00000603230 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
AMBP-204ENST00000603230 CFTRP13569 1480 aa27.64■■■□□ 2.01
AMBP-204ENST00000603230 CUX2O14529 1486 aa27.59■■■□□ 2.01
AMBP-204ENST00000603230 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
AMBP-204ENST00000603230 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
AMBP-204ENST00000603230 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
AMBP-204ENST00000603230 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
AMBP-204ENST00000603230 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
AMBP-204ENST00000603230 WDR62O43379 1518 aa27.31■■□□□ 1.96
AMBP-204ENST00000603230 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
AMBP-204ENST00000603230 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
AMBP-204ENST00000603230 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
AMBP-204ENST00000603230 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
AMBP-204ENST00000603230 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
AMBP-204ENST00000603230 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
AMBP-204ENST00000603230 CUX1P39880 1505 aa26.84■■□□□ 1.89
AMBP-204ENST00000603230 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
AMBP-204ENST00000603230 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
AMBP-204ENST00000603230 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
AMBP-204ENST00000603230 SOGA1O94964 1423 aa26.77■■□□□ 1.88
AMBP-204ENST00000603230 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
AMBP-204ENST00000603230 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
AMBP-204ENST00000603230 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
AMBP-204ENST00000603230 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.868e-13■■■■□ 24.1
AMBP-204ENST00000603230 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
AMBP-204ENST00000603230 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
AMBP-204ENST00000603230 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
AMBP-204ENST00000603230 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
AMBP-204ENST00000603230 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
AMBP-204ENST00000603230 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
AMBP-204ENST00000603230 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
AMBP-204ENST00000603230 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
AMBP-204ENST00000603230 FBLN2P98095 1184 aa26.46■■□□□ 1.83
AMBP-204ENST00000603230 GRIN2BQ13224 1484 aa26.43■■□□□ 1.82
AMBP-204ENST00000603230 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
AMBP-204ENST00000603230 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
AMBP-204ENST00000603230 CHD1O14646 1710 aa26.36■■□□□ 1.81
AMBP-204ENST00000603230 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
AMBP-204ENST00000603230 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
AMBP-204ENST00000603230 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
AMBP-204ENST00000603230 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
AMBP-204ENST00000603230 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
AMBP-204ENST00000603230 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
AMBP-204ENST00000603230 KIF27Q86VH2 1401 aa26.14■■□□□ 1.78
AMBP-204ENST00000603230 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
AMBP-204ENST00000603230 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
AMBP-204ENST00000603230 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
AMBP-204ENST00000603230 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
AMBP-204ENST00000603230 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
AMBP-204ENST00000603230 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
AMBP-204ENST00000603230 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
AMBP-204ENST00000603230 IGF1RP08069 1367 aa26.03■■□□□ 1.76
AMBP-204ENST00000603230 ARHGEF11O15085 1522 aa26.03■■□□□ 1.76
AMBP-204ENST00000603230 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
AMBP-204ENST00000603230 NUP160Q12769 1436 aa25.94■■□□□ 1.74
AMBP-204ENST00000603230 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
AMBP-204ENST00000603230 CUL7Q14999 1698 aa25.93■■□□□ 1.74
AMBP-204ENST00000603230 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
AMBP-204ENST00000603230 CARMIL1Q5VZK9 1371 aa25.9■■□□□ 1.74
AMBP-204ENST00000603230 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
AMBP-204ENST00000603230 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
AMBP-204ENST00000603230 JPH4Q96JJ6 628 aa25.77■■□□□ 1.72
AMBP-204ENST00000603230 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms