RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
FN1-205ENST00000357867 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
FN1-205ENST00000357867 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
FN1-205ENST00000357867 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
FN1-205ENST00000357867 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
FN1-205ENST00000357867 APLP2Q06481 763 aa17.48■□□□□ 0.39
FN1-205ENST00000357867 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
FN1-205ENST00000357867 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
FN1-205ENST00000357867 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
FN1-205ENST00000357867 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
FN1-205ENST00000357867 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
FN1-205ENST00000357867 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
FN1-205ENST00000357867 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
FN1-205ENST00000357867 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
FN1-205ENST00000357867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
FN1-205ENST00000357867 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
FN1-205ENST00000357867 PCGF6Q9BYE7 350 aa16.43■□□□□ 0.22
FN1-205ENST00000357867 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
FN1-205ENST00000357867 ABCC9O60706 1549 aa16.37■□□□□ 0.21
FN1-205ENST00000357867 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
FN1-205ENST00000357867 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
FN1-205ENST00000357867 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
FN1-205ENST00000357867 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
FN1-205ENST00000357867 NEFLP07196 543 aa16.09■□□□□ 0.17
FN1-205ENST00000357867 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
FN1-205ENST00000357867 ITGAEP38570 1179 aa16.01■□□□□ 0.15
FN1-205ENST00000357867 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
FN1-205ENST00000357867 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
FN1-205ENST00000357867 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
FN1-205ENST00000357867 FBLN2P98095 1184 aa15.93■□□□□ 0.14
FN1-205ENST00000357867 PPARGC1BQ86YN6 1023 aaKnown RBP15.88■□□□□ 0.13
FN1-205ENST00000357867 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
FN1-205ENST00000357867 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
FN1-205ENST00000357867 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.11
FN1-205ENST00000357867 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
FN1-205ENST00000357867 BCANQ96GW7 911 aa15.72■□□□□ 0.11
FN1-205ENST00000357867 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
FN1-205ENST00000357867 TRIM52Q96A61 297 aa15.68■□□□□ 0.1
FN1-205ENST00000357867 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
FN1-205ENST00000357867 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
FN1-205ENST00000357867 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
FN1-205ENST00000357867 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
FN1-205ENST00000357867 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
FN1-205ENST00000357867 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
FN1-205ENST00000357867 LOC105371045A0A1W2PR82 267 aa15.51■□□□□ 0.07
FN1-205ENST00000357867 NEFMP07197 916 aa15.5■□□□□ 0.07
FN1-205ENST00000357867 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
FN1-205ENST00000357867 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
FN1-205ENST00000357867 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
FN1-205ENST00000357867 ZNF326Q5BKZ1 582 aaKnown RBP15.41■□□□□ 0.06
FN1-205ENST00000357867 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
FN1-205ENST00000357867 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
FN1-205ENST00000357867 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
FN1-205ENST00000357867 NACADO15069 1562 aa15.36■□□□□ 0.05
FN1-205ENST00000357867 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
FN1-205ENST00000357867 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
FN1-205ENST00000357867 ZNF316A6NFI3 1004 aaPredicted RBP15.33■□□□□ 0.05
FN1-205ENST00000357867 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
FN1-205ENST00000357867 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
FN1-205ENST00000357867 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
FN1-205ENST00000357867 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
FN1-205ENST00000357867 HRCP23327 699 aa15.23■□□□□ 0.03
FN1-205ENST00000357867 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
FN1-205ENST00000357867 ANP32CO43423 234 aa15.22■□□□□ 0.03
FN1-205ENST00000357867 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
FN1-205ENST00000357867 DIEXFQ68CQ4 756 aaKnown RBP15.11■□□□□ 0.01
FN1-205ENST00000357867 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
FN1-205ENST00000357867 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
FN1-205ENST00000357867 TSPY4P0CV99 314 aa15.07■□□□□ 0
FN1-205ENST00000357867 TSPY10P0CW01 314 aa15.07■□□□□ 0
FN1-205ENST00000357867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
FN1-205ENST00000357867 BCL11AQ9H165 835 aa15.05■□□□□ 0
FN1-205ENST00000357867 ARID4BQ4LE39 1312 aaPredicted RBP15.03■□□□□ -0
FN1-205ENST00000357867 RTL5Q5HYW3 569 aaPredicted RBP15.03■□□□□ -0
FN1-205ENST00000357867 MYT1Q01538 1121 aa15.01□□□□□ -0.01
FN1-205ENST00000357867 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
FN1-205ENST00000357867 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
FN1-205ENST00000357867 TONSLQ96HA7 1378 aa15□□□□□ -0.01
FN1-205ENST00000357867 NPM2Q86SE8 214 aaKnown RBP14.97□□□□□ -0.01
FN1-205ENST00000357867 PPP1R15AO75807 674 aaPredicted RBP14.97□□□□□ -0.01
FN1-205ENST00000357867 A0A0G2JS52 829 aa14.96□□□□□ -0.01
FN1-205ENST00000357867 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
FN1-205ENST00000357867 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
FN1-205ENST00000357867 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
FN1-205ENST00000357867 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
FN1-205ENST00000357867 PLEKHD1A6NEE1 506 aa14.91□□□□□ -0.02
FN1-205ENST00000357867 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
FN1-205ENST00000357867 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
FN1-205ENST00000357867 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
FN1-205ENST00000357867 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
FN1-205ENST00000357867 ZBTB7CA1YPR0 619 aa14.8□□□□□ -0.04
FN1-205ENST00000357867 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
FN1-205ENST00000357867 WDR43Q15061 677 aaKnown RBP eCLIP14.79□□□□□ -0.04
FN1-205ENST00000357867 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
FN1-205ENST00000357867 EEA1Q15075 1411 aa14.76□□□□□ -0.05
FN1-205ENST00000357867 HSP90AA1P07900 732 aaKnown RBP14.76□□□□□ -0.05
FN1-205ENST00000357867 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
FN1-205ENST00000357867 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
FN1-205ENST00000357867 TMC1Q8TDI8 760 aa14.74□□□□□ -0.05
FN1-205ENST00000357867 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms