RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 DCAF8L2P0C7V8 631 aa9.51□□□□□ -0.89
FN1-224ENST00000492816 FAM9AQ8IZU1 332 aaPredicted RBP9.2□□□□□ -0.94
FN1-224ENST00000492816 APLP2Q06481 763 aa8.63□□□□□ -1.03
FN1-224ENST00000492816 NISCHQ9Y2I1 1504 aa8.51□□□□□ -1.05
FN1-224ENST00000492816 MYT1LQ9UL68 1186 aa8.46□□□□□ -1.05
FN1-224ENST00000492816 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
FN1-224ENST00000492816 ATP1B4Q9UN42 357 aaPredicted RBP8.35□□□□□ -1.07
FN1-224ENST00000492816 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
FN1-224ENST00000492816 EHMT2Q96KQ7 1210 aa8.23□□□□□ -1.09
FN1-224ENST00000492816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
FN1-224ENST00000492816 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
FN1-224ENST00000492816 SHROOM4Q9ULL8 1493 aa8.13□□□□□ -1.11
FN1-224ENST00000492816 CHIC1Q5VXU3 224 aa8.12□□□□□ -1.11
FN1-224ENST00000492816 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
FN1-224ENST00000492816 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
FN1-224ENST00000492816 CCER1Q8TC90 406 aaPredicted RBP8.08□□□□□ -1.12
FN1-224ENST00000492816 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
FN1-224ENST00000492816 SLC4A1APQ9BWU0 796 aaKnown RBP8.03□□□□□ -1.12
FN1-224ENST00000492816 BCANQ96GW7 911 aa8□□□□□ -1.13
FN1-224ENST00000492816 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
FN1-224ENST00000492816 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
FN1-224ENST00000492816 NPM1P06748 294 aaKnown RBP eCLIP7.91□□□□□ -1.14
FN1-224ENST00000492816 FBLN2P98095 1184 aa7.88□□□□□ -1.15
FN1-224ENST00000492816 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
FN1-224ENST00000492816 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
FN1-224ENST00000492816 POLR3GLQ9BT43 218 aa7.83□□□□□ -1.16
FN1-224ENST00000492816 DAXXQ9UER7 740 aaPredicted RBP7.83□□□□□ -1.16
FN1-224ENST00000492816 NEFLP07196 543 aa7.82□□□□□ -1.16
FN1-224ENST00000492816 NEFMP07197 916 aa7.81□□□□□ -1.16
FN1-224ENST00000492816 ZBTB47Q9UFB7 747 aaPredicted RBP7.8□□□□□ -1.16
FN1-224ENST00000492816 PLPPR3Q6T4P5 718 aa7.79□□□□□ -1.16
FN1-224ENST00000492816 STAG3Q9UJ98 1225 aa7.79□□□□□ -1.16
FN1-224ENST00000492816 AEBP2Q6ZN18 517 aaPredicted RBP7.74□□□□□ -1.17
FN1-224ENST00000492816 NPM2Q86SE8 214 aaKnown RBP7.72□□□□□ -1.17
FN1-224ENST00000492816 SCAF1Q9H7N4 1312 aaKnown RBP7.7□□□□□ -1.18
FN1-224ENST00000492816 A0A0G2JS52 829 aa7.69□□□□□ -1.18
FN1-224ENST00000492816 PCGF6Q9BYE7 350 aa7.68□□□□□ -1.18
FN1-224ENST00000492816 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
FN1-224ENST00000492816 ITGAEP38570 1179 aa7.65□□□□□ -1.19
FN1-224ENST00000492816 DCAF8L1A6NGE4 600 aa7.65□□□□□ -1.19
FN1-224ENST00000492816 TRHP20396 242 aaPredicted RBP7.64□□□□□ -1.19
FN1-224ENST00000492816 ABCC9O60706 1549 aa7.64□□□□□ -1.19
FN1-224ENST00000492816 CLSPNQ9HAW4 1339 aa7.64□□□□□ -1.19
FN1-224ENST00000492816 C14orf37Q86TY3 774 aa7.64□□□□□ -1.19
FN1-224ENST00000492816 CENPBP07199 599 aaPredicted RBP7.62□□□□□ -1.19
FN1-224ENST00000492816 YTHDC1Q96MU7 727 aaKnown RBP7.62□□□□□ -1.19
FN1-224ENST00000492816 PABPN1Q86U42 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
FN1-224ENST00000492816 CDK11AQ9UQ88 783 aaPredicted RBP7.62□□□□□ -1.19
FN1-224ENST00000492816 ZEB1P37275 1124 aaPredicted RBP7.61□□□□□ -1.19
FN1-224ENST00000492816 TRIM52Q96A61 297 aa7.61□□□□□ -1.19
FN1-224ENST00000492816 ARID4BQ4LE39 1312 aaPredicted RBP7.59□□□□□ -1.19
FN1-224ENST00000492816 FOXD1Q16676 465 aa7.56□□□□□ -1.2
FN1-224ENST00000492816 MYT1Q01538 1121 aa7.55□□□□□ -1.2
FN1-224ENST00000492816 CNGB1Q14028 1251 aaPredicted RBP7.55□□□□□ -1.2
FN1-224ENST00000492816 CHGAP10645 457 aaKnown RBP7.55□□□□□ -1.2
FN1-224ENST00000492816 ZNF316A6NFI3 1004 aaPredicted RBP7.54□□□□□ -1.2
FN1-224ENST00000492816 CDK11BP21127 795 aaKnown RBP7.54□□□□□ -1.2
FN1-224ENST00000492816 NPHP1O15259 732 aa7.53□□□□□ -1.2
FN1-224ENST00000492816 FAM50AQ14320 339 aaKnown RBP7.53□□□□□ -1.2
FN1-224ENST00000492816 CANXP27824 592 aaKnown RBP7.5□□□□□ -1.21
FN1-224ENST00000492816 PPP1R15AO75807 674 aaPredicted RBP7.5□□□□□ -1.21
FN1-224ENST00000492816 CHMP7Q8WUX9 453 aaPredicted RBP7.49□□□□□ -1.21
FN1-224ENST00000492816 ZNF777Q9ULD5 760 aaPredicted RBP7.47□□□□□ -1.21
FN1-224ENST00000492816 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.21
FN1-224ENST00000492816 ZBTB7CA1YPR0 619 aa7.45□□□□□ -1.22
FN1-224ENST00000492816 TMX4Q9H1E5 349 aaPredicted RBP7.43□□□□□ -1.22
FN1-224ENST00000492816 ERCC6Q03468 1493 aa7.42□□□□□ -1.22
FN1-224ENST00000492816 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
FN1-224ENST00000492816 KRI1Q8N9T8 703 aaKnown RBP7.42□□□□□ -1.22
FN1-224ENST00000492816 EIF4G2P78344 907 aaKnown RBP eCLIP7.4□□□□□ -1.22
FN1-224ENST00000492816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.39□□□□□ -1.23
FN1-224ENST00000492816 ARXQ96QS3 562 aa7.39□□□□□ -1.23
FN1-224ENST00000492816 HDGFP51858 240 aaKnown RBP7.38□□□□□ -1.23
FN1-224ENST00000492816 PHF23Q9BUL5 403 aaPredicted RBP7.37□□□□□ -1.23
FN1-224ENST00000492816 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
FN1-224ENST00000492816 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
FN1-224ENST00000492816 GOLGA2Q08379 1002 aa7.37□□□□□ -1.23
FN1-224ENST00000492816 LMOD2Q6P5Q4 547 aa7.34□□□□□ -1.23
FN1-224ENST00000492816 SENP3Q9H4L4 574 aaPredicted RBP7.33□□□□□ -1.24
FN1-224ENST00000492816 TSPY4P0CV99 314 aa7.32□□□□□ -1.24
FN1-224ENST00000492816 TSPY10P0CW01 314 aa7.32□□□□□ -1.24
FN1-224ENST00000492816 MEX3CQ5U5Q3 659 aaKnown RBP7.3□□□□□ -1.24
FN1-224ENST00000492816 CCDC9Q9Y3X0 531 aaKnown RBP7.3□□□□□ -1.24
FN1-224ENST00000492816 NEUROD1Q13562 356 aa7.27□□□□□ -1.25
FN1-224ENST00000492816 RTL5Q5HYW3 569 aaPredicted RBP7.27□□□□□ -1.25
FN1-224ENST00000492816 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
FN1-224ENST00000492816 KCNH8Q96L42 1107 aa7.27□□□□□ -1.25
FN1-224ENST00000492816 P3H3Q8IVL6 736 aa7.27□□□□□ -1.25
FN1-224ENST00000492816 MYH16Q9H6N6 1097 aa7.26□□□□□ -1.25
FN1-224ENST00000492816 TULP1O00294 542 aaPredicted RBP7.25□□□□□ -1.25
FN1-224ENST00000492816 G3V3G9 751 aa7.24□□□□□ -1.25
FN1-224ENST00000492816 DCAF8Q5TAQ9 597 aa7.24□□□□□ -1.25
FN1-224ENST00000492816 HSP90AA1P07900 732 aaKnown RBP7.24□□□□□ -1.25
FN1-224ENST00000492816 ANP32BQ92688 251 aaKnown RBP7.23□□□□□ -1.25
FN1-224ENST00000492816 PLEKHD1A6NEE1 506 aa7.22□□□□□ -1.25
FN1-224ENST00000492816 ANP32CO43423 234 aa7.22□□□□□ -1.25
FN1-224ENST00000492816 SF3B2Q13435 895 aaKnown RBP7.22□□□□□ -1.25
FN1-224ENST00000492816 NCBP3Q53F19 620 aaKnown RBP7.21□□□□□ -1.26
FN1-224ENST00000492816 UPF2Q9HAU5 1272 aaKnown RBP7.2□□□□□ -1.26
FN1-224ENST00000492816 FKBP8Q14318 412 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms