RNA–Protein interactions for RNA: ENST00000551783.1

RPLP0-223, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

TSL 2

Gene RPLP0, Length 676 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-223ENST00000551783 NISCHQ9Y2I1 1504 aa48.32■■■■■ 5.33
RPLP0-223ENST00000551783 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
RPLP0-223ENST00000551783 ABCC9O60706 1549 aa43.02■■■■■ 4.48
RPLP0-223ENST00000551783 RB1CC1Q8TDY2 1594 aa40.98■■■■■ 4.15
RPLP0-223ENST00000551783 NACADO15069 1562 aa40.74■■■■■ 4.11
RPLP0-223ENST00000551783 DCAF8L2P0C7V8 631 aa40.64■■■■■ 4.1
RPLP0-223ENST00000551783 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
RPLP0-223ENST00000551783 MYO15BQ96JP2 1530 aa40.2■■■■■ 4.03
RPLP0-223ENST00000551783 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.02
RPLP0-223ENST00000551783 DNAJC5BQ9UF47 199 aa40.1■■■■■ 4.01
RPLP0-223ENST00000551783 PABPN1Q86U42 306 aaKnown RBP eCLIP40.08■■■■■ 4.01
RPLP0-223ENST00000551783 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
RPLP0-223ENST00000551783 DCAF1Q9Y4B6 1507 aa39.84■■■■□ 3.97
RPLP0-223ENST00000551783 SCRIBQ14160 1630 aa39.55■■■■□ 3.92
RPLP0-223ENST00000551783 SHROOM4Q9ULL8 1493 aa39.12■■■■□ 3.85
RPLP0-223ENST00000551783 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
RPLP0-223ENST00000551783 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
RPLP0-223ENST00000551783 CECR2Q9BXF3 1484 aa38.65■■■■□ 3.78
RPLP0-223ENST00000551783 SMARCA4P51532 1647 aa37.7■■■■□ 3.63
RPLP0-223ENST00000551783 NCAPD3P42695 1498 aa37.58■■■■□ 3.61
RPLP0-223ENST00000551783 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
RPLP0-223ENST00000551783 BAZ1AQ9NRL2 1556 aaPredicted RBP37.46■■■■□ 3.59
RPLP0-223ENST00000551783 SMARCA2P51531 1590 aa37.45■■■■□ 3.59
RPLP0-223ENST00000551783 HMGXB3Q12766 1538 aa37.39■■■■□ 3.58
RPLP0-223ENST00000551783 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.56
RPLP0-223ENST00000551783 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
RPLP0-223ENST00000551783 BAZ1BQ9UIG0 1483 aaKnown RBP37.23■■■■□ 3.55
RPLP0-223ENST00000551783 NESP48681 1621 aa37.1■■■■□ 3.53
RPLP0-223ENST00000551783 ERCC6Q03468 1493 aa37.03■■■■□ 3.52
RPLP0-223ENST00000551783 WIZO95785 1651 aa36.96■■■■□ 3.51
RPLP0-223ENST00000551783 CUX2O14529 1486 aa36.8■■■■□ 3.48
RPLP0-223ENST00000551783 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
RPLP0-223ENST00000551783 KIF21AQ7Z4S6 1674 aa36.69■■■■□ 3.46
RPLP0-223ENST00000551783 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
RPLP0-223ENST00000551783 RSF1Q96T23 1441 aaPredicted RBP36.58■■■■□ 3.45
RPLP0-223ENST00000551783 CADPSQ9ULU8 1353 aa36.45■■■■□ 3.43
RPLP0-223ENST00000551783 DNAJC5Q9H3Z4 198 aa36.43■■■■□ 3.42
RPLP0-223ENST00000551783 PDS5BQ9NTI5 1447 aa36.42■■■■□ 3.42
RPLP0-223ENST00000551783 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
RPLP0-223ENST00000551783 MRC2Q9UBG0 1479 aa36.19■■■■□ 3.38
RPLP0-223ENST00000551783 CFTRP13569 1480 aa36.14■■■■□ 3.38
RPLP0-223ENST00000551783 WDR62O43379 1518 aa36.13■■■■□ 3.38
RPLP0-223ENST00000551783 FANCD2Q9BXW9 1451 aa36.11■■■■□ 3.37
RPLP0-223ENST00000551783 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
RPLP0-223ENST00000551783 PRDM2Q13029 1718 aa35.98■■■■□ 3.35
RPLP0-223ENST00000551783 CCDC88BA6NC98 1476 aa35.98■■■■□ 3.35
RPLP0-223ENST00000551783 URB2Q14146 1524 aaKnown RBP35.87■■■■□ 3.33
RPLP0-223ENST00000551783 TOPBP1Q92547 1522 aa35.5■■■■□ 3.27
RPLP0-223ENST00000551783 ZNF608Q9ULD9 1512 aaPredicted RBP35.4■■■■□ 3.26
RPLP0-223ENST00000551783 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
RPLP0-223ENST00000551783 IFT140Q96RY7 1462 aa35.33■■■■□ 3.25
RPLP0-223ENST00000551783 ABCC8Q09428 1581 aa35.26■■■■□ 3.24
RPLP0-223ENST00000551783 EIF4G3O43432 1585 aaKnown RBP35.23■■■■□ 3.23
RPLP0-223ENST00000551783 TARBP1Q13395 1621 aaKnown RBP35.21■■■■□ 3.23
RPLP0-223ENST00000551783 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.23
RPLP0-223ENST00000551783 POLA1P09884 1462 aaPredicted RBP35.15■■■■□ 3.22
RPLP0-223ENST00000551783 OSCARQ8IYS5 282 aa35.12■■■■□ 3.21
RPLP0-223ENST00000551783 TRIM41Q8WV44 630 aa35.07■■■■□ 3.2
RPLP0-223ENST00000551783 RAD54L2Q9Y4B4 1467 aa35.07■■■■□ 3.2
RPLP0-223ENST00000551783 AQRO60306 1485 aaKnown RBP eCLIP35.06■■■■□ 3.27e-14■■■■■ 100
RPLP0-223ENST00000551783 CUX1P39880 1505 aa35.04■■■■□ 3.2
RPLP0-223ENST00000551783 FGD5Q6ZNL6 1462 aa34.99■■■■□ 3.19
RPLP0-223ENST00000551783 CHD1O14646 1710 aa34.98■■■■□ 3.19
RPLP0-223ENST00000551783 SOGA1O94964 1423 aa34.92■■■■□ 3.18
RPLP0-223ENST00000551783 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
RPLP0-223ENST00000551783 RIMBP3CA6NJZ7 1639 aa34.86■■■■□ 3.17
RPLP0-223ENST00000551783 RIMBP3BA6NNM3 1639 aa34.86■■■■□ 3.17
RPLP0-223ENST00000551783 RIMBP3Q9UFD9 1639 aa34.86■■■■□ 3.17
RPLP0-223ENST00000551783 WDR97A6NE52 1622 aa34.83■■■■□ 3.17
RPLP0-223ENST00000551783 SNAPC4Q5SXM2 1469 aa34.72■■■■□ 3.15
RPLP0-223ENST00000551783 ARHGEF11O15085 1522 aa34.72■■■■□ 3.15
RPLP0-223ENST00000551783 FBLN2P98095 1184 aa34.71■■■■□ 3.15
RPLP0-223ENST00000551783 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
RPLP0-223ENST00000551783 SYNJ1O43426 1573 aa34.58■■■■□ 3.13
RPLP0-223ENST00000551783 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
RPLP0-223ENST00000551783 ABCA5Q8WWZ7 1642 aa34.57■■■■□ 3.12
RPLP0-223ENST00000551783 BIVM-ERCC5R4GMW8 1640 aa34.56■■■■□ 3.12
RPLP0-223ENST00000551783 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
RPLP0-223ENST00000551783 MAGI1Q96QZ7 1491 aaPredicted RBP34.54■■■■□ 3.12
RPLP0-223ENST00000551783 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
RPLP0-223ENST00000551783 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
RPLP0-223ENST00000551783 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
RPLP0-223ENST00000551783 CLASP1Q7Z460 1538 aa34.47■■■■□ 3.11
RPLP0-223ENST00000551783 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
RPLP0-223ENST00000551783 CHMP7Q8WUX9 453 aaPredicted RBP34.43■■■■□ 3.1
RPLP0-223ENST00000551783 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
RPLP0-223ENST00000551783 CYB5RLQ6IPT4 315 aa34.38■■■■□ 3.09
RPLP0-223ENST00000551783 ADAMTS12P58397 1594 aa34.28■■■■□ 3.08
RPLP0-223ENST00000551783 GRIN2AQ12879 1464 aa34.19■■■■□ 3.06
RPLP0-223ENST00000551783 CEP170Q5SW79 1584 aa34.15■■■■□ 3.06
RPLP0-223ENST00000551783 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
RPLP0-223ENST00000551783 ERCC6L2Q5T890 1561 aa34.08■■■■□ 3.05
RPLP0-223ENST00000551783 FHAD1B1AJZ9 1412 aa34.06■■■■□ 3.04
RPLP0-223ENST00000551783 NUP160Q12769 1436 aa34.04■■■■□ 3.04
RPLP0-223ENST00000551783 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
RPLP0-223ENST00000551783 TRHP20396 242 aaPredicted RBP33.88■■■■□ 3.01
RPLP0-223ENST00000551783 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
RPLP0-223ENST00000551783 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
RPLP0-223ENST00000551783 IGF1RP08069 1367 aa33.72■■■□□ 2.99
RPLP0-223ENST00000551783 CUL7Q14999 1698 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 1009.1 ms