RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
ERBB2-219ENST00000584601 DCAF8L2P0C7V8 631 aa21.21■□□□□ 0.99
ERBB2-219ENST00000584601 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
ERBB2-219ENST00000584601 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
ERBB2-219ENST00000584601 PCGF6Q9BYE7 350 aa19.36■□□□□ 0.69
ERBB2-219ENST00000584601 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
ERBB2-219ENST00000584601 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
ERBB2-219ENST00000584601 APLP2Q06481 763 aa18.91■□□□□ 0.62
ERBB2-219ENST00000584601 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
ERBB2-219ENST00000584601 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.62
ERBB2-219ENST00000584601 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
ERBB2-219ENST00000584601 HRCP23327 699 aa18.84■□□□□ 0.61
ERBB2-219ENST00000584601 CENPBP07199 599 aaPredicted RBP18.73■□□□□ 0.59
ERBB2-219ENST00000584601 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-219ENST00000584601 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
ERBB2-219ENST00000584601 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
ERBB2-219ENST00000584601 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
ERBB2-219ENST00000584601 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.55
ERBB2-219ENST00000584601 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
ERBB2-219ENST00000584601 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
ERBB2-219ENST00000584601 MYT1Q01538 1121 aa18.42■□□□□ 0.54
ERBB2-219ENST00000584601 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
ERBB2-219ENST00000584601 ABCC9O60706 1549 aa18.34■□□□□ 0.53
ERBB2-219ENST00000584601 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
ERBB2-219ENST00000584601 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.51
ERBB2-219ENST00000584601 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
ERBB2-219ENST00000584601 ERICH6Q7L0X2 663 aa18.06■□□□□ 0.48
ERBB2-219ENST00000584601 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.483e-9■□□□□ 10.8
ERBB2-219ENST00000584601 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
ERBB2-219ENST00000584601 NEFLP07196 543 aa17.97■□□□□ 0.47
ERBB2-219ENST00000584601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
ERBB2-219ENST00000584601 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
ERBB2-219ENST00000584601 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
ERBB2-219ENST00000584601 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
ERBB2-219ENST00000584601 ITGAEP38570 1179 aa17.78■□□□□ 0.44
ERBB2-219ENST00000584601 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
ERBB2-219ENST00000584601 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
ERBB2-219ENST00000584601 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.4
ERBB2-219ENST00000584601 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.4
ERBB2-219ENST00000584601 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-219ENST00000584601 FAM50AQ14320 339 aaKnown RBP17.44■□□□□ 0.38
ERBB2-219ENST00000584601 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
ERBB2-219ENST00000584601 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
ERBB2-219ENST00000584601 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
ERBB2-219ENST00000584601 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
ERBB2-219ENST00000584601 NACADO15069 1562 aa17.34■□□□□ 0.37
ERBB2-219ENST00000584601 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-219ENST00000584601 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.36
ERBB2-219ENST00000584601 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
ERBB2-219ENST00000584601 BCANQ96GW7 911 aa17.31■□□□□ 0.36
ERBB2-219ENST00000584601 TRIM52Q96A61 297 aa17.24■□□□□ 0.35
ERBB2-219ENST00000584601 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
ERBB2-219ENST00000584601 FBLN2P98095 1184 aa17.19■□□□□ 0.34
ERBB2-219ENST00000584601 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-219ENST00000584601 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-219ENST00000584601 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-219ENST00000584601 ANP32CO43423 234 aa17.13■□□□□ 0.33
ERBB2-219ENST00000584601 CLSPNQ9HAW4 1339 aa17.1■□□□□ 0.33
ERBB2-219ENST00000584601 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-219ENST00000584601 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
ERBB2-219ENST00000584601 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
ERBB2-219ENST00000584601 EEA1Q15075 1411 aa17.03■□□□□ 0.32
ERBB2-219ENST00000584601 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
ERBB2-219ENST00000584601 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
ERBB2-219ENST00000584601 MIER1Q8N108 512 aa17■□□□□ 0.31
ERBB2-219ENST00000584601 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
ERBB2-219ENST00000584601 CLIP1P30622 1438 aa16.97■□□□□ 0.31
ERBB2-219ENST00000584601 FKBP8Q14318 412 aa16.96■□□□□ 0.31
ERBB2-219ENST00000584601 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.31
ERBB2-219ENST00000584601 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
ERBB2-219ENST00000584601 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
ERBB2-219ENST00000584601 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
ERBB2-219ENST00000584601 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.3
ERBB2-219ENST00000584601 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
ERBB2-219ENST00000584601 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
ERBB2-219ENST00000584601 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
ERBB2-219ENST00000584601 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
ERBB2-219ENST00000584601 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
ERBB2-219ENST00000584601 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
ERBB2-219ENST00000584601 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
ERBB2-219ENST00000584601 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
ERBB2-219ENST00000584601 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
ERBB2-219ENST00000584601 CHIC2Q9UKJ5 165 aa16.71■□□□□ 0.27
ERBB2-219ENST00000584601 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
ERBB2-219ENST00000584601 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
ERBB2-219ENST00000584601 SOGA1O94964 1423 aa16.66■□□□□ 0.26
ERBB2-219ENST00000584601 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
ERBB2-219ENST00000584601 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
ERBB2-219ENST00000584601 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
ERBB2-219ENST00000584601 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
ERBB2-219ENST00000584601 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
ERBB2-219ENST00000584601 WIZO95785 1651 aa16.6■□□□□ 0.25
ERBB2-219ENST00000584601 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
ERBB2-219ENST00000584601 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
ERBB2-219ENST00000584601 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
ERBB2-219ENST00000584601 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
ERBB2-219ENST00000584601 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
ERBB2-219ENST00000584601 SUPT16HQ9Y5B9 1047 aaKnown RBP16.55■□□□□ 0.24
ERBB2-219ENST00000584601 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
ERBB2-219ENST00000584601 CUX2O14529 1486 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms