RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
FN1-207ENST00000421182 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
FN1-207ENST00000421182 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
FN1-207ENST00000421182 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
FN1-207ENST00000421182 APLP2Q06481 763 aa17.61■□□□□ 0.41
FN1-207ENST00000421182 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
FN1-207ENST00000421182 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
FN1-207ENST00000421182 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.33
FN1-207ENST00000421182 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
FN1-207ENST00000421182 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
FN1-207ENST00000421182 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
FN1-207ENST00000421182 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
FN1-207ENST00000421182 UBTFP17480 764 aaKnown RBP16.68■□□□□ 0.26
FN1-207ENST00000421182 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
FN1-207ENST00000421182 ABCC9O60706 1549 aa16.54■□□□□ 0.24
FN1-207ENST00000421182 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
FN1-207ENST00000421182 CENPBP07199 599 aaPredicted RBP16.52■□□□□ 0.23
FN1-207ENST00000421182 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
FN1-207ENST00000421182 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
FN1-207ENST00000421182 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
FN1-207ENST00000421182 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
FN1-207ENST00000421182 NEFLP07196 543 aa16.38■□□□□ 0.21
FN1-207ENST00000421182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.21
FN1-207ENST00000421182 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.21
FN1-207ENST00000421182 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
FN1-207ENST00000421182 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
FN1-207ENST00000421182 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
FN1-207ENST00000421182 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
FN1-207ENST00000421182 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
FN1-207ENST00000421182 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
FN1-207ENST00000421182 ITGAEP38570 1179 aa15.92■□□□□ 0.14
FN1-207ENST00000421182 POLR3GLQ9BT43 218 aa15.92■□□□□ 0.14
FN1-207ENST00000421182 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
FN1-207ENST00000421182 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
FN1-207ENST00000421182 FBLN2P98095 1184 aa15.79■□□□□ 0.12
FN1-207ENST00000421182 MYT1Q01538 1121 aa15.78■□□□□ 0.12
FN1-207ENST00000421182 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
FN1-207ENST00000421182 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
FN1-207ENST00000421182 NACADO15069 1562 aa15.69■□□□□ 0.1
FN1-207ENST00000421182 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
FN1-207ENST00000421182 NEFMP07197 916 aa15.64■□□□□ 0.09
FN1-207ENST00000421182 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
FN1-207ENST00000421182 CDK11AQ9UQ88 783 aaPredicted RBP15.64■□□□□ 0.09
FN1-207ENST00000421182 ESF1Q9H501 851 aaKnown RBP15.63■□□□□ 0.09
FN1-207ENST00000421182 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
FN1-207ENST00000421182 BCANQ96GW7 911 aa15.59■□□□□ 0.09
FN1-207ENST00000421182 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.09
FN1-207ENST00000421182 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
FN1-207ENST00000421182 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
FN1-207ENST00000421182 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
FN1-207ENST00000421182 HRCP23327 699 aa15.45■□□□□ 0.06
FN1-207ENST00000421182 LOC105371045A0A1W2PR82 267 aa15.45■□□□□ 0.06
FN1-207ENST00000421182 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
FN1-207ENST00000421182 ANP32CO43423 234 aa15.4■□□□□ 0.06
FN1-207ENST00000421182 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
FN1-207ENST00000421182 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
FN1-207ENST00000421182 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
FN1-207ENST00000421182 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
FN1-207ENST00000421182 ZNF326Q5BKZ1 582 aaKnown RBP15.36■□□□□ 0.05
FN1-207ENST00000421182 CANXP27824 592 aaKnown RBP15.34■□□□□ 0.05
FN1-207ENST00000421182 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
FN1-207ENST00000421182 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.03
FN1-207ENST00000421182 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
FN1-207ENST00000421182 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
FN1-207ENST00000421182 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
FN1-207ENST00000421182 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
FN1-207ENST00000421182 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
FN1-207ENST00000421182 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
FN1-207ENST00000421182 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
FN1-207ENST00000421182 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
FN1-207ENST00000421182 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
FN1-207ENST00000421182 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
FN1-207ENST00000421182 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
FN1-207ENST00000421182 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
FN1-207ENST00000421182 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
FN1-207ENST00000421182 MTUS2Q5JR59 1369 aa15.03■□□□□ -0
FN1-207ENST00000421182 SMARCA2P51531 1590 aa15.02■□□□□ -0
FN1-207ENST00000421182 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
FN1-207ENST00000421182 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
FN1-207ENST00000421182 EEA1Q15075 1411 aa14.98□□□□□ -0.01
FN1-207ENST00000421182 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
FN1-207ENST00000421182 ANP32BQ92688 251 aaKnown RBP14.97□□□□□ -0.01
FN1-207ENST00000421182 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
FN1-207ENST00000421182 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
FN1-207ENST00000421182 HSP90AA1P07900 732 aaKnown RBP14.95□□□□□ -0.02
FN1-207ENST00000421182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
FN1-207ENST00000421182 BCL11AQ9H165 835 aa14.93□□□□□ -0.02
FN1-207ENST00000421182 PPP1R15AO75807 674 aaPredicted RBP14.93□□□□□ -0.02
FN1-207ENST00000421182 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
FN1-207ENST00000421182 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
FN1-207ENST00000421182 WDR43Q15061 677 aaKnown RBP eCLIP14.9□□□□□ -0.02
FN1-207ENST00000421182 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
FN1-207ENST00000421182 C14orf37Q86TY3 774 aa14.89□□□□□ -0.03
FN1-207ENST00000421182 MYH16Q9H6N6 1097 aa14.88□□□□□ -0.03
FN1-207ENST00000421182 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
FN1-207ENST00000421182 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
FN1-207ENST00000421182 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
FN1-207ENST00000421182 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
FN1-207ENST00000421182 GOLGA3Q08378 1498 aa14.84□□□□□ -0.03
FN1-207ENST00000421182 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 632.6 ms