RNA–Protein interactions for RNA: ENST00000550296.5

RPLP0-216, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

TSL 2

Gene RPLP0, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-216ENST00000550296 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
RPLP0-216ENST00000550296 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.03
RPLP0-216ENST00000550296 ABCC9O60706 1549 aa27.52■■■□□ 2
RPLP0-216ENST00000550296 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
RPLP0-216ENST00000550296 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
RPLP0-216ENST00000550296 NACADO15069 1562 aa26.15■■□□□ 1.78
RPLP0-216ENST00000550296 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
RPLP0-216ENST00000550296 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
RPLP0-216ENST00000550296 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
RPLP0-216ENST00000550296 DCAF1Q9Y4B6 1507 aa25.67■■□□□ 1.7
RPLP0-216ENST00000550296 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
RPLP0-216ENST00000550296 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
RPLP0-216ENST00000550296 BICRAQ9NZM4 1560 aa25.51■■□□□ 1.67
RPLP0-216ENST00000550296 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
RPLP0-216ENST00000550296 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
RPLP0-216ENST00000550296 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
RPLP0-216ENST00000550296 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
RPLP0-216ENST00000550296 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
RPLP0-216ENST00000550296 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
RPLP0-216ENST00000550296 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
RPLP0-216ENST00000550296 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
RPLP0-216ENST00000550296 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
RPLP0-216ENST00000550296 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
RPLP0-216ENST00000550296 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
RPLP0-216ENST00000550296 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
RPLP0-216ENST00000550296 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
RPLP0-216ENST00000550296 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
RPLP0-216ENST00000550296 NESP48681 1621 aa23.74■■□□□ 1.39
RPLP0-216ENST00000550296 WIZO95785 1651 aa23.74■■□□□ 1.39
RPLP0-216ENST00000550296 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
RPLP0-216ENST00000550296 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
RPLP0-216ENST00000550296 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
RPLP0-216ENST00000550296 CUX2O14529 1486 aa23.51■■□□□ 1.35
RPLP0-216ENST00000550296 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
RPLP0-216ENST00000550296 PDS5BQ9NTI5 1447 aa23.43■■□□□ 1.34
RPLP0-216ENST00000550296 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
RPLP0-216ENST00000550296 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
RPLP0-216ENST00000550296 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
RPLP0-216ENST00000550296 CFTRP13569 1480 aa23.25■■□□□ 1.31
RPLP0-216ENST00000550296 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
RPLP0-216ENST00000550296 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
RPLP0-216ENST00000550296 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
RPLP0-216ENST00000550296 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
RPLP0-216ENST00000550296 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
RPLP0-216ENST00000550296 WDR62O43379 1518 aa23.12■■□□□ 1.29
RPLP0-216ENST00000550296 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
RPLP0-216ENST00000550296 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
RPLP0-216ENST00000550296 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
RPLP0-216ENST00000550296 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
RPLP0-216ENST00000550296 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
RPLP0-216ENST00000550296 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
RPLP0-216ENST00000550296 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
RPLP0-216ENST00000550296 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
RPLP0-216ENST00000550296 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
RPLP0-216ENST00000550296 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
RPLP0-216ENST00000550296 TARBP1Q13395 1621 aaKnown RBP22.55■■□□□ 1.2
RPLP0-216ENST00000550296 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
RPLP0-216ENST00000550296 CUX1P39880 1505 aa22.53■■□□□ 1.2
RPLP0-216ENST00000550296 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
RPLP0-216ENST00000550296 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.23e-7■■■■■ 91.9
RPLP0-216ENST00000550296 SOGA1O94964 1423 aa22.51■■□□□ 1.19
RPLP0-216ENST00000550296 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
RPLP0-216ENST00000550296 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
RPLP0-216ENST00000550296 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
RPLP0-216ENST00000550296 FBLN2P98095 1184 aa22.37■■□□□ 1.17
RPLP0-216ENST00000550296 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
RPLP0-216ENST00000550296 CHD1O14646 1710 aa22.29■■□□□ 1.16
RPLP0-216ENST00000550296 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
RPLP0-216ENST00000550296 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
RPLP0-216ENST00000550296 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
RPLP0-216ENST00000550296 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
RPLP0-216ENST00000550296 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
RPLP0-216ENST00000550296 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
RPLP0-216ENST00000550296 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
RPLP0-216ENST00000550296 BIVM-ERCC5R4GMW8 1640 aa22.22■■□□□ 1.15
RPLP0-216ENST00000550296 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
RPLP0-216ENST00000550296 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
RPLP0-216ENST00000550296 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
RPLP0-216ENST00000550296 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
RPLP0-216ENST00000550296 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
RPLP0-216ENST00000550296 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
RPLP0-216ENST00000550296 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
RPLP0-216ENST00000550296 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
RPLP0-216ENST00000550296 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
RPLP0-216ENST00000550296 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
RPLP0-216ENST00000550296 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
RPLP0-216ENST00000550296 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
RPLP0-216ENST00000550296 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
RPLP0-216ENST00000550296 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
RPLP0-216ENST00000550296 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
RPLP0-216ENST00000550296 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
RPLP0-216ENST00000550296 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
RPLP0-216ENST00000550296 NUP160Q12769 1436 aa21.87■■□□□ 1.09
RPLP0-216ENST00000550296 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
RPLP0-216ENST00000550296 IGF1RP08069 1367 aa21.81■■□□□ 1.08
RPLP0-216ENST00000550296 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
RPLP0-216ENST00000550296 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
RPLP0-216ENST00000550296 SHROOM2Q13796 1616 aa21.7■■□□□ 1.06
RPLP0-216ENST00000550296 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
RPLP0-216ENST00000550296 CUL7Q14999 1698 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms