RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
AL049839.2-201ENST00000553947 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
AL049839.2-201ENST00000553947 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
AL049839.2-201ENST00000553947 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
AL049839.2-201ENST00000553947 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
AL049839.2-201ENST00000553947 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
AL049839.2-201ENST00000553947 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
AL049839.2-201ENST00000553947 ABCC9O60706 1549 aa15.32■□□□□ 0.04
AL049839.2-201ENST00000553947 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
AL049839.2-201ENST00000553947 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
AL049839.2-201ENST00000553947 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
AL049839.2-201ENST00000553947 NACADO15069 1562 aa15.15■□□□□ 0.02
AL049839.2-201ENST00000553947 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
AL049839.2-201ENST00000553947 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
AL049839.2-201ENST00000553947 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
AL049839.2-201ENST00000553947 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
AL049839.2-201ENST00000553947 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
AL049839.2-201ENST00000553947 HRCP23327 699 aa14.84□□□□□ -0.03
AL049839.2-201ENST00000553947 WIZO95785 1651 aa14.76□□□□□ -0.05
AL049839.2-201ENST00000553947 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
AL049839.2-201ENST00000553947 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
AL049839.2-201ENST00000553947 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
AL049839.2-201ENST00000553947 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
AL049839.2-201ENST00000553947 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
AL049839.2-201ENST00000553947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
AL049839.2-201ENST00000553947 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
AL049839.2-201ENST00000553947 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.07
AL049839.2-201ENST00000553947 MYT1Q01538 1121 aa14.52□□□□□ -0.08
AL049839.2-201ENST00000553947 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
AL049839.2-201ENST00000553947 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
AL049839.2-201ENST00000553947 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
AL049839.2-201ENST00000553947 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
AL049839.2-201ENST00000553947 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
AL049839.2-201ENST00000553947 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
AL049839.2-201ENST00000553947 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
AL049839.2-201ENST00000553947 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
AL049839.2-201ENST00000553947 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
AL049839.2-201ENST00000553947 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
AL049839.2-201ENST00000553947 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
AL049839.2-201ENST00000553947 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
AL049839.2-201ENST00000553947 TRIM26Q12899 539 aaPredicted RBP14.22□□□□□ -0.13
AL049839.2-201ENST00000553947 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.14
AL049839.2-201ENST00000553947 SOGA1O94964 1423 aa14.17□□□□□ -0.14
AL049839.2-201ENST00000553947 RUSC2Q8N2Y8 1516 aa14.13□□□□□ -0.15
AL049839.2-201ENST00000553947 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
AL049839.2-201ENST00000553947 SYNJ1O43426 1573 aa14.08□□□□□ -0.16
AL049839.2-201ENST00000553947 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
AL049839.2-201ENST00000553947 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
AL049839.2-201ENST00000553947 EEA1Q15075 1411 aa14.02□□□□□ -0.16
AL049839.2-201ENST00000553947 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
AL049839.2-201ENST00000553947 CEP162Q5TB80 1403 aa13.99□□□□□ -0.17
AL049839.2-201ENST00000553947 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
AL049839.2-201ENST00000553947 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
AL049839.2-201ENST00000553947 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
AL049839.2-201ENST00000553947 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
AL049839.2-201ENST00000553947 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
AL049839.2-201ENST00000553947 KIF21BO75037 1637 aa13.87□□□□□ -0.19
AL049839.2-201ENST00000553947 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
AL049839.2-201ENST00000553947 CFTRP13569 1480 aa13.86□□□□□ -0.19
AL049839.2-201ENST00000553947 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
AL049839.2-201ENST00000553947 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
AL049839.2-201ENST00000553947 CUX1P39880 1505 aa13.84□□□□□ -0.19
AL049839.2-201ENST00000553947 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
AL049839.2-201ENST00000553947 RAPGEF2Q9Y4G8 1499 aa13.83□□□□□ -0.2
AL049839.2-201ENST00000553947 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
AL049839.2-201ENST00000553947 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
AL049839.2-201ENST00000553947 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
AL049839.2-201ENST00000553947 CLIP1P30622 1438 aa13.77□□□□□ -0.21
AL049839.2-201ENST00000553947 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
AL049839.2-201ENST00000553947 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
AL049839.2-201ENST00000553947 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
AL049839.2-201ENST00000553947 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
AL049839.2-201ENST00000553947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
AL049839.2-201ENST00000553947 CENPBP07199 599 aaPredicted RBP13.71□□□□□ -0.22
AL049839.2-201ENST00000553947 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
AL049839.2-201ENST00000553947 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
AL049839.2-201ENST00000553947 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
AL049839.2-201ENST00000553947 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
AL049839.2-201ENST00000553947 CUX2O14529 1486 aa13.62□□□□□ -0.23
AL049839.2-201ENST00000553947 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
AL049839.2-201ENST00000553947 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
AL049839.2-201ENST00000553947 NESP48681 1621 aa13.6□□□□□ -0.23
AL049839.2-201ENST00000553947 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
AL049839.2-201ENST00000553947 IGF1RP08069 1367 aa13.59□□□□□ -0.23
AL049839.2-201ENST00000553947 APLP2Q06481 763 aa13.56□□□□□ -0.24
AL049839.2-201ENST00000553947 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
AL049839.2-201ENST00000553947 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
AL049839.2-201ENST00000553947 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
AL049839.2-201ENST00000553947 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
AL049839.2-201ENST00000553947 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
AL049839.2-201ENST00000553947 CARMIL1Q5VZK9 1371 aa13.51□□□□□ -0.25
AL049839.2-201ENST00000553947 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
AL049839.2-201ENST00000553947 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
AL049839.2-201ENST00000553947 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
AL049839.2-201ENST00000553947 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
AL049839.2-201ENST00000553947 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
AL049839.2-201ENST00000553947 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
AL049839.2-201ENST00000553947 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
AL049839.2-201ENST00000553947 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
AL049839.2-201ENST00000553947 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms