RNA–Protein interactions for RNA: ENST00000495183.5

HLA-A-207, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-207ENST00000495183 NISCHQ9Y2I1 1504 aa58.23■■■■■ 6.91
HLA-A-207ENST00000495183 CCDC180Q9P1Z9 1646 aa51.44■■■■■ 5.83
HLA-A-207ENST00000495183 ABCC9O60706 1549 aa49.92■■■■■ 5.58
HLA-A-207ENST00000495183 ZCCHC6Q5VYS8 1495 aaKnown RBP48.61■■■■■ 5.37
HLA-A-207ENST00000495183 DCAF8L2P0C7V8 631 aa48.59■■■■■ 5.37
HLA-A-207ENST00000495183 NACADO15069 1562 aa48.28■■■■■ 5.32
HLA-A-207ENST00000495183 RB1CC1Q8TDY2 1594 aa48.19■■■■■ 5.31
HLA-A-207ENST00000495183 DCAF1Q9Y4B6 1507 aa48.15■■■■■ 5.3
HLA-A-207ENST00000495183 MYO15BQ96JP2 1530 aa48.13■■■■■ 5.3
HLA-A-207ENST00000495183 SCRIBQ14160 1630 aa47.08■■■■■ 5.13
HLA-A-207ENST00000495183 UNC13AQ9UPW8 1703 aa47.08■■■■■ 5.13
HLA-A-207ENST00000495183 PABPN1Q86U42 306 aaKnown RBP eCLIP46.81■■■■■ 5.08
HLA-A-207ENST00000495183 BICRAQ9NZM4 1560 aa46.72■■■■■ 5.07
HLA-A-207ENST00000495183 SHROOM4Q9ULL8 1493 aa46.47■■■■■ 5.03
HLA-A-207ENST00000495183 EIF4G1Q04637 1599 aaKnown RBP45.45■■■■■ 4.87
HLA-A-207ENST00000495183 CECR2Q9BXF3 1484 aa45.35■■■■■ 4.85
HLA-A-207ENST00000495183 DNAJC5BQ9UF47 199 aa45.33■■■■■ 4.85
HLA-A-207ENST00000495183 CC2D2AQ9P2K1 1620 aa45.13■■■■■ 4.82
HLA-A-207ENST00000495183 BAZ1AQ9NRL2 1556 aaPredicted RBP45.08■■■■■ 4.81
HLA-A-207ENST00000495183 SMARCA4P51532 1647 aa45.05■■■■■ 4.8
HLA-A-207ENST00000495183 MROH2BQ7Z745 1585 aa44.91■■■■■ 4.78
HLA-A-207ENST00000495183 ATAD2BQ9ULI0 1458 aa44.69■■■■■ 4.74
HLA-A-207ENST00000495183 SMARCA2P51531 1590 aa44.64■■■■■ 4.74
HLA-A-207ENST00000495183 RSF1Q96T23 1441 aaPredicted RBP44.62■■■■■ 4.73
HLA-A-207ENST00000495183 PEG3Q9GZU2 1588 aa44.57■■■■■ 4.72
HLA-A-207ENST00000495183 NCAPD3P42695 1498 aa44.56■■■■■ 4.72
HLA-A-207ENST00000495183 WIZO95785 1651 aa44.45■■■■■ 4.71
HLA-A-207ENST00000495183 BAZ1BQ9UIG0 1483 aaKnown RBP44.36■■■■■ 4.69
HLA-A-207ENST00000495183 HMGXB3Q12766 1538 aa44.36■■■■■ 4.69
HLA-A-207ENST00000495183 SUPT5HO00267 1087 aaKnown RBP44.03■■■■■ 4.64
HLA-A-207ENST00000495183 TOP2AP11388 1531 aaKnown RBP43.98■■■■■ 4.63
HLA-A-207ENST00000495183 CCDC88BA6NC98 1476 aa43.51■■■■■ 4.56
HLA-A-207ENST00000495183 NESP48681 1621 aa43.36■■■■■ 4.53
HLA-A-207ENST00000495183 CADPSQ9ULU8 1353 aa43.33■■■■■ 4.53
HLA-A-207ENST00000495183 LAMC3Q9Y6N6 1575 aa43.27■■■■■ 4.52
HLA-A-207ENST00000495183 CFTRP13569 1480 aa43.17■■■■■ 4.5
HLA-A-207ENST00000495183 PDS5BQ9NTI5 1447 aa43■■■■■ 4.47
HLA-A-207ENST00000495183 ERCC6Q03468 1493 aa42.98■■■■■ 4.47
HLA-A-207ENST00000495183 FANCD2Q9BXW9 1451 aa42.82■■■■■ 4.45
HLA-A-207ENST00000495183 KIF21AQ7Z4S6 1674 aa42.81■■■■■ 4.44
HLA-A-207ENST00000495183 PRDM2Q13029 1718 aa42.8■■■■■ 4.44
HLA-A-207ENST00000495183 CEP164Q9UPV0 1460 aa42.71■■■■■ 4.43
HLA-A-207ENST00000495183 MRC2Q9UBG0 1479 aa42.51■■■■■ 4.4
HLA-A-207ENST00000495183 THOC2Q8NI27 1593 aaKnown RBP42.5■■■■■ 4.39
HLA-A-207ENST00000495183 URB2Q14146 1524 aaKnown RBP42.35■■■■■ 4.37
HLA-A-207ENST00000495183 WDR62O43379 1518 aa42.33■■■■■ 4.37
HLA-A-207ENST00000495183 CUX2O14529 1486 aa42.25■■■■■ 4.35
HLA-A-207ENST00000495183 ABCC8Q09428 1581 aa42.2■■■■■ 4.35
HLA-A-207ENST00000495183 TOPBP1Q92547 1522 aa42.19■■■■■ 4.35
HLA-A-207ENST00000495183 DNMBPQ6XZF7 1577 aa42.16■■■■■ 4.34
HLA-A-207ENST00000495183 CUX1P39880 1505 aa42.09■■■■■ 4.33
HLA-A-207ENST00000495183 WRNQ14191 1432 aaPredicted RBP eCLIP42.05■■■■■ 4.32
HLA-A-207ENST00000495183 SYNJ1O43426 1573 aa41.9■■■■■ 4.3
HLA-A-207ENST00000495183 POLA1P09884 1462 aaPredicted RBP41.88■■■■■ 4.29
HLA-A-207ENST00000495183 FGD5Q6ZNL6 1462 aa41.87■■■■■ 4.29
HLA-A-207ENST00000495183 TOP2BQ02880 1626 aa41.85■■■■■ 4.29
HLA-A-207ENST00000495183 BIVM-ERCC5R4GMW8 1640 aa41.82■■■■■ 4.29
HLA-A-207ENST00000495183 IFT140Q96RY7 1462 aa41.78■■■■■ 4.28
HLA-A-207ENST00000495183 SOGA1O94964 1423 aa41.75■■■■■ 4.27
HLA-A-207ENST00000495183 RAD54L2Q9Y4B4 1467 aa41.73■■■■■ 4.27
HLA-A-207ENST00000495183 TARBP1Q13395 1621 aaKnown RBP41.66■■■■■ 4.26
HLA-A-207ENST00000495183 ZNF608Q9ULD9 1512 aaPredicted RBP41.57■■■■■ 4.25
HLA-A-207ENST00000495183 TRIM41Q8WV44 630 aa41.53■■■■■ 4.24
HLA-A-207ENST00000495183 TDRD9Q8NDG6 1382 aaKnown RBP41.47■■■■■ 4.23
HLA-A-207ENST00000495183 ABCA10Q8WWZ4 1543 aa41.47■■■■■ 4.23
HLA-A-207ENST00000495183 AQRO60306 1485 aaKnown RBP eCLIP41.43■■■■■ 4.22
HLA-A-207ENST00000495183 WDR97A6NE52 1622 aa41.42■■■■■ 4.22
HLA-A-207ENST00000495183 CHIC1Q5VXU3 224 aa41.39■■■■■ 4.22
HLA-A-207ENST00000495183 EIF4G3O43432 1585 aaKnown RBP41.38■■■■■ 4.22
HLA-A-207ENST00000495183 GAPVD1Q14C86 1478 aa41.26■■■■■ 4.2
HLA-A-207ENST00000495183 ABCA5Q8WWZ7 1642 aa41.23■■■■■ 4.19
HLA-A-207ENST00000495183 GRIN2BQ13224 1484 aa41.16■■■■■ 4.18
HLA-A-207ENST00000495183 KIF27Q86VH2 1401 aa41.13■■■■■ 4.18
HLA-A-207ENST00000495183 PBRM1Q86U86 1689 aa41.07■■■■■ 4.17
HLA-A-207ENST00000495183 SNAPC4Q5SXM2 1469 aa41.04■■■■■ 4.16
HLA-A-207ENST00000495183 MAGI1Q96QZ7 1491 aaPredicted RBP40.97■■■■■ 4.15
HLA-A-207ENST00000495183 ERICH3Q5RHP9 1530 aa40.97■■■■■ 4.15
HLA-A-207ENST00000495183 RUSC2Q8N2Y8 1516 aa40.96■■■■■ 4.15
HLA-A-207ENST00000495183 IGF1RP08069 1367 aa40.91■■■■■ 4.14
HLA-A-207ENST00000495183 FBLN2P98095 1184 aa40.89■■■■■ 4.14
HLA-A-207ENST00000495183 CHMP7Q8WUX9 453 aaPredicted RBP40.84■■■■■ 4.13
HLA-A-207ENST00000495183 SYNJ2O15056 1496 aa40.82■■■■■ 4.12
HLA-A-207ENST00000495183 ADAMTS12P58397 1594 aa40.8■■■■■ 4.12
HLA-A-207ENST00000495183 FHAD1B1AJZ9 1412 aa40.79■■■■■ 4.12
HLA-A-207ENST00000495183 CHD1O14646 1710 aa40.75■■■■■ 4.11
HLA-A-207ENST00000495183 OSCARQ8IYS5 282 aa40.7■■■■■ 4.11
HLA-A-207ENST00000495183 FAM9AQ8IZU1 332 aaPredicted RBP40.7■■■■■ 4.11
HLA-A-207ENST00000495183 CUL7Q14999 1698 aa40.69■■■■■ 4.1
HLA-A-207ENST00000495183 EEA1Q15075 1411 aa40.69■■■■■ 4.1
HLA-A-207ENST00000495183 CARMIL1Q5VZK9 1371 aa40.68■■■■■ 4.1
HLA-A-207ENST00000495183 CSRNP3Q8WYN3 585 aa40.63■■■■■ 4.1
HLA-A-207ENST00000495183 GRIN2AQ12879 1464 aa40.63■■■■■ 4.09
HLA-A-207ENST00000495183 RAPGEF2Q9Y4G8 1499 aa40.48■■■■■ 4.07
HLA-A-207ENST00000495183 PRXQ9BXM0 1461 aa40.46■■■■■ 4.07
HLA-A-207ENST00000495183 NUP160Q12769 1436 aa40.41■■■■■ 4.06
HLA-A-207ENST00000495183 CEP170Q5SW79 1584 aa40.4■■■■■ 4.06
HLA-A-207ENST00000495183 DNAJC5Q9H3Z4 198 aa40.35■■■■■ 4.05
HLA-A-207ENST00000495183 CLASP1Q7Z460 1538 aa40.32■■■■■ 4.04
HLA-A-207ENST00000495183 KIF21BO75037 1637 aa40.21■■■■■ 4.03
HLA-A-207ENST00000495183 KIAA0586Q9BVV6 1533 aa40.18■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms