Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.47■■□□□ 1.51
PDLIM5Q96HC4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.47■■□□□ 1.51
PDLIM5Q96HC4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDLIM5Q96HC4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDLIM5Q96HC4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM5Q96HC4 ABHD17AP4-201ENST00000411545 909 ntBASIC24.46■■□□□ 1.51
PDLIM5Q96HC4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM5Q96HC4 AC008813.1-201ENST00000536597 885 ntBASIC24.46■■□□□ 1.51
PDLIM5Q96HC4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PDLIM5Q96HC4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
PDLIM5Q96HC4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 AL449106.1-201ENST00000608517 1980 ntBASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
PDLIM5Q96HC4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM5Q96HC4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM5Q96HC4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM5Q96HC4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 WHAMMP3-201ENST00000611636 1609 ntBASIC24.43■■□□□ 1.5
PDLIM5Q96HC4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM5Q96HC4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.42■■□□□ 1.5
PDLIM5Q96HC4 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.41■■□□□ 1.5
PDLIM5Q96HC4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PDLIM5Q96HC4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM5Q96HC4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM5Q96HC4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.4■■□□□ 1.5
PDLIM5Q96HC4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM5Q96HC4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.39■■□□□ 1.5
PDLIM5Q96HC4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDLIM5Q96HC4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.39■■□□□ 1.49
PDLIM5Q96HC4 AC148477.6-201ENST00000623746 465 ntBASIC24.39■■□□□ 1.49
PDLIM5Q96HC4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDLIM5Q96HC4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PDLIM5Q96HC4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PDLIM5Q96HC4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM5Q96HC4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.37■■□□□ 1.49
PDLIM5Q96HC4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM5Q96HC4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM5Q96HC4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM5Q96HC4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM5Q96HC4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PDLIM5Q96HC4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM5Q96HC4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PDLIM5Q96HC4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM5Q96HC4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM5Q96HC4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.33■■□□□ 1.49
PDLIM5Q96HC4 AP004609.3-201ENST00000610705 1884 ntBASIC24.33■■□□□ 1.49
PDLIM5Q96HC4 CR559946.2-201ENST00000623684 991 ntBASIC24.33■■□□□ 1.49
PDLIM5Q96HC4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.33■■□□□ 1.49
PDLIM5Q96HC4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
PDLIM5Q96HC4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.33■■□□□ 1.48
PDLIM5Q96HC4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 MIR219A2-201ENST00000608502 1504 ntBASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.32■■□□□ 1.48
PDLIM5Q96HC4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 AC142472.1-201ENST00000612013 1741 ntBASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM5Q96HC4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 MIR3648-2-201ENST00000581792 180 ntBASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 MIR3648-1-201ENST00000615959 180 ntBASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM5Q96HC4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms