Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CASKIN1Q8WXD9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC39.51■■■■□ 3.91
CASKIN1Q8WXD9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CASKIN1Q8WXD9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CASKIN1Q8WXD9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
CASKIN1Q8WXD9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
CASKIN1Q8WXD9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
CASKIN1Q8WXD9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC39.48■■■■□ 3.91
CASKIN1Q8WXD9 REST-210ENST00000638187 1334 ntTSL 5 BASIC39.48■■■■□ 3.91
CASKIN1Q8WXD9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC39.47■■■■□ 3.91
CASKIN1Q8WXD9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
CASKIN1Q8WXD9 ABCB10P1-201ENST00000614297 2181 ntBASIC39.46■■■■□ 3.91
CASKIN1Q8WXD9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
CASKIN1Q8WXD9 AC004987.1-201ENST00000428627 508 ntBASIC39.45■■■■□ 3.91
CASKIN1Q8WXD9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC39.45■■■■□ 3.91
CASKIN1Q8WXD9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC39.45■■■■□ 3.91
CASKIN1Q8WXD9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC39.44■■■■□ 3.9
CASKIN1Q8WXD9 AC009831.1-201ENST00000580420 1582 ntBASIC39.44■■■■□ 3.9
CASKIN1Q8WXD9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
CASKIN1Q8WXD9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC39.43■■■■□ 3.9
CASKIN1Q8WXD9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
CASKIN1Q8WXD9 TSPY13P-201ENST00000338964 914 ntBASIC39.42■■■■□ 3.9
CASKIN1Q8WXD9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC39.42■■■■□ 3.9
CASKIN1Q8WXD9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
CASKIN1Q8WXD9 ATP5G2P3-201ENST00000429083 425 ntBASIC39.41■■■■□ 3.9
CASKIN1Q8WXD9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
CASKIN1Q8WXD9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC39.41■■■■□ 3.9
CASKIN1Q8WXD9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC39.4■■■■□ 3.9
CASKIN1Q8WXD9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC39.4■■■■□ 3.9
CASKIN1Q8WXD9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC39.39■■■■□ 3.9
CASKIN1Q8WXD9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
CASKIN1Q8WXD9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC39.39■■■■□ 3.9
CASKIN1Q8WXD9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC39.39■■■■□ 3.9
CASKIN1Q8WXD9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC39.39■■■■□ 3.9
CASKIN1Q8WXD9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC39.38■■■■□ 3.9
CASKIN1Q8WXD9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC39.38■■■■□ 3.9
CASKIN1Q8WXD9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
CASKIN1Q8WXD9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC39.36■■■■□ 3.89
CASKIN1Q8WXD9 SMPD5-203ENST00000639008 1464 ntBASIC39.35■■■■□ 3.89
CASKIN1Q8WXD9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC39.35■■■■□ 3.89
CASKIN1Q8WXD9 AL592293.1-201ENST00000502889 1188 ntBASIC39.35■■■■□ 3.89
CASKIN1Q8WXD9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
CASKIN1Q8WXD9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC39.35■■■■□ 3.89
CASKIN1Q8WXD9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
CASKIN1Q8WXD9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC39.34■■■■□ 3.89
CASKIN1Q8WXD9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC39.34■■■■□ 3.89
CASKIN1Q8WXD9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
CASKIN1Q8WXD9 AC129492.7-201ENST00000622992 756 ntBASIC39.34■■■■□ 3.89
CASKIN1Q8WXD9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
CASKIN1Q8WXD9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC39.33■■■■□ 3.89
CASKIN1Q8WXD9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
CASKIN1Q8WXD9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.33■■■■□ 3.89
CASKIN1Q8WXD9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
CASKIN1Q8WXD9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC39.31■■■■□ 3.88
CASKIN1Q8WXD9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
CASKIN1Q8WXD9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
CASKIN1Q8WXD9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC39.31■■■■□ 3.88
CASKIN1Q8WXD9 AC026202.3-201ENST00000600805 1127 ntBASIC39.31■■■■□ 3.88
CASKIN1Q8WXD9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC39.3■■■■□ 3.88
CASKIN1Q8WXD9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC39.3■■■■□ 3.88
CASKIN1Q8WXD9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
CASKIN1Q8WXD9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC39.3■■■■□ 3.88
CASKIN1Q8WXD9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
CASKIN1Q8WXD9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CASKIN1Q8WXD9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CASKIN1Q8WXD9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC39.28■■■■□ 3.88
CASKIN1Q8WXD9 RAP2CP1-202ENST00000605179 643 ntBASIC39.28■■■■□ 3.88
CASKIN1Q8WXD9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC39.28■■■■□ 3.88
CASKIN1Q8WXD9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC39.27■■■■□ 3.88
CASKIN1Q8WXD9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC39.26■■■■□ 3.88
CASKIN1Q8WXD9 AC133552.2-201ENST00000619106 1032 ntBASIC39.26■■■■□ 3.88
CASKIN1Q8WXD9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC39.26■■■■□ 3.87
CASKIN1Q8WXD9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
CASKIN1Q8WXD9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC39.24■■■■□ 3.87
CASKIN1Q8WXD9 HES4-204ENST00000484667 667 ntTSL 3 BASIC39.24■■■■□ 3.87
CASKIN1Q8WXD9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC39.24■■■■□ 3.87
CASKIN1Q8WXD9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CASKIN1Q8WXD9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CASKIN1Q8WXD9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC39.23■■■■□ 3.87
CASKIN1Q8WXD9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC39.22■■■■□ 3.87
CASKIN1Q8WXD9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC39.22■■■■□ 3.87
CASKIN1Q8WXD9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
CASKIN1Q8WXD9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC39.22■■■■□ 3.87
CASKIN1Q8WXD9 RP9P-202ENST00000450133 1212 ntBASIC39.22■■■■□ 3.87
CASKIN1Q8WXD9 AC093536.1-201ENST00000569153 554 ntBASIC39.22■■■■□ 3.87
CASKIN1Q8WXD9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC39.21■■■■□ 3.87
CASKIN1Q8WXD9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC39.21■■■■□ 3.87
CASKIN1Q8WXD9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
CASKIN1Q8WXD9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC39.21■■■■□ 3.87
CASKIN1Q8WXD9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
CASKIN1Q8WXD9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CASKIN1Q8WXD9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CASKIN1Q8WXD9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC39.2■■■■□ 3.87
CASKIN1Q8WXD9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC39.2■■■■□ 3.87
CASKIN1Q8WXD9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC39.2■■■■□ 3.87
CASKIN1Q8WXD9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC39.19■■■■□ 3.86
CASKIN1Q8WXD9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
CASKIN1Q8WXD9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
CASKIN1Q8WXD9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
CASKIN1Q8WXD9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC39.19■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms