Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SH3TC1Q8TE82 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.48■■■□□ 2.63
SH3TC1Q8TE82 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SH3TC1Q8TE82 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.46■■■□□ 2.63
SH3TC1Q8TE82 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SH3TC1Q8TE82 AC004987.1-201ENST00000428627 508 ntBASIC31.46■■■□□ 2.63
SH3TC1Q8TE82 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.46■■■□□ 2.63
SH3TC1Q8TE82 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SH3TC1Q8TE82 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SH3TC1Q8TE82 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SH3TC1Q8TE82 TSPY13P-201ENST00000338964 914 ntBASIC31.45■■■□□ 2.62
SH3TC1Q8TE82 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.45■■■□□ 2.62
SH3TC1Q8TE82 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 ATP5G2P3-201ENST00000429083 425 ntBASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
SH3TC1Q8TE82 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SH3TC1Q8TE82 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SH3TC1Q8TE82 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.43■■■□□ 2.62
SH3TC1Q8TE82 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SH3TC1Q8TE82 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
SH3TC1Q8TE82 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SH3TC1Q8TE82 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SH3TC1Q8TE82 AP002414.2-202ENST00000590929 1450 ntBASIC31.42■■■□□ 2.62
SH3TC1Q8TE82 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SH3TC1Q8TE82 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
SH3TC1Q8TE82 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SH3TC1Q8TE82 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SH3TC1Q8TE82 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 SMPD5-203ENST00000639008 1464 ntBASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SH3TC1Q8TE82 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC1Q8TE82 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.38■■■□□ 2.61
SH3TC1Q8TE82 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC1Q8TE82 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.38■■■□□ 2.61
SH3TC1Q8TE82 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC1Q8TE82 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SH3TC1Q8TE82 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SH3TC1Q8TE82 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SH3TC1Q8TE82 AC009831.1-201ENST00000580420 1582 ntBASIC31.36■■■□□ 2.61
SH3TC1Q8TE82 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.35■■■□□ 2.61
SH3TC1Q8TE82 AC025884.2-201ENST00000553429 711 ntBASIC31.35■■■□□ 2.61
SH3TC1Q8TE82 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH3TC1Q8TE82 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
SH3TC1Q8TE82 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.34■■■□□ 2.61
SH3TC1Q8TE82 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.33■■■□□ 2.61
SH3TC1Q8TE82 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH3TC1Q8TE82 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SH3TC1Q8TE82 AC133552.2-201ENST00000619106 1032 ntBASIC31.33■■■□□ 2.61
SH3TC1Q8TE82 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH3TC1Q8TE82 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH3TC1Q8TE82 AL592293.1-201ENST00000502889 1188 ntBASIC31.32■■■□□ 2.6
SH3TC1Q8TE82 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.32■■■□□ 2.6
SH3TC1Q8TE82 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH3TC1Q8TE82 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
SH3TC1Q8TE82 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SH3TC1Q8TE82 AC129492.7-201ENST00000622992 756 ntBASIC31.31■■■□□ 2.6
SH3TC1Q8TE82 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SH3TC1Q8TE82 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.31■■■□□ 2.6
SH3TC1Q8TE82 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SH3TC1Q8TE82 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SH3TC1Q8TE82 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SH3TC1Q8TE82 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.29■■■□□ 2.6
SH3TC1Q8TE82 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SH3TC1Q8TE82 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
SH3TC1Q8TE82 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.29■■■□□ 2.6
SH3TC1Q8TE82 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SH3TC1Q8TE82 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SH3TC1Q8TE82 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SH3TC1Q8TE82 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SH3TC1Q8TE82 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SH3TC1Q8TE82 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SH3TC1Q8TE82 AC026202.3-201ENST00000600805 1127 ntBASIC31.27■■■□□ 2.6
SH3TC1Q8TE82 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3TC1Q8TE82 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3TC1Q8TE82 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
SH3TC1Q8TE82 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.25■■■□□ 2.59
SH3TC1Q8TE82 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.24■■■□□ 2.59
SH3TC1Q8TE82 RP9P-202ENST00000450133 1212 ntBASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms