Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.36■■□□□ 1.01
C11orf88Q6PI97 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
C11orf88Q6PI97 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
C11orf88Q6PI97 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.35■■□□□ 1.01
C11orf88Q6PI97 ABHD17AP4-201ENST00000411545 909 ntBASIC21.35■■□□□ 1.01
C11orf88Q6PI97 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.35■■□□□ 1.01
C11orf88Q6PI97 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
C11orf88Q6PI97 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.35■■□□□ 1.01
C11orf88Q6PI97 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
C11orf88Q6PI97 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf88Q6PI97 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
C11orf88Q6PI97 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf88Q6PI97 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.34■■□□□ 1.01
C11orf88Q6PI97 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C11orf88Q6PI97 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.33■■□□□ 1.01
C11orf88Q6PI97 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
C11orf88Q6PI97 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
C11orf88Q6PI97 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf88Q6PI97 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.32■■□□□ 1
C11orf88Q6PI97 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.32■■□□□ 1
C11orf88Q6PI97 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf88Q6PI97 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf88Q6PI97 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C11orf88Q6PI97 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
C11orf88Q6PI97 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.32■■□□□ 1
C11orf88Q6PI97 AC091060.1-201ENST00000623524 1766 ntBASIC21.31■■□□□ 1
C11orf88Q6PI97 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.31■■□□□ 1
C11orf88Q6PI97 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.31■■□□□ 1
C11orf88Q6PI97 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.31■■□□□ 1
C11orf88Q6PI97 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C11orf88Q6PI97 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.3■■□□□ 1
C11orf88Q6PI97 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.3■■□□□ 1
C11orf88Q6PI97 AC020928.2-201ENST00000588717 2197 ntBASIC21.3■■□□□ 1
C11orf88Q6PI97 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf88Q6PI97 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.29■■□□□ 1
C11orf88Q6PI97 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.29■■□□□ 1
C11orf88Q6PI97 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
C11orf88Q6PI97 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf88Q6PI97 MIR7108-201ENST00000614319 87 ntBASIC21.29■■□□□ 1
C11orf88Q6PI97 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf88Q6PI97 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf88Q6PI97 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C11orf88Q6PI97 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.28■■□□□ 1
C11orf88Q6PI97 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.28■■□□□ 1
C11orf88Q6PI97 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.28■■□□□ 1
C11orf88Q6PI97 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
C11orf88Q6PI97 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.28■■□□□ 1
C11orf88Q6PI97 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C11orf88Q6PI97 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
C11orf88Q6PI97 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C11orf88Q6PI97 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C11orf88Q6PI97 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.27■■□□□ 1
C11orf88Q6PI97 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
C11orf88Q6PI97 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C11orf88Q6PI97 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
C11orf88Q6PI97 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.24■□□□□ 0.99
C11orf88Q6PI97 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.24■□□□□ 0.99
C11orf88Q6PI97 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf88Q6PI97 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf88Q6PI97 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf88Q6PI97 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C11orf88Q6PI97 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C11orf88Q6PI97 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
C11orf88Q6PI97 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C11orf88Q6PI97 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
C11orf88Q6PI97 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
C11orf88Q6PI97 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf88Q6PI97 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
C11orf88Q6PI97 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
C11orf88Q6PI97 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf88Q6PI97 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf88Q6PI97 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
C11orf88Q6PI97 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
C11orf88Q6PI97 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms