Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CDKN2DP55273 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.68■■□□□ 1.54
CDKN2DP55273 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.68■■□□□ 1.54
CDKN2DP55273 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDKN2DP55273 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.68■■□□□ 1.54
CDKN2DP55273 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDKN2DP55273 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.68■■□□□ 1.54
CDKN2DP55273 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKN2DP55273 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDKN2DP55273 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L13-201ENST00000554103 1267 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L15-201ENST00000611059 1267 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L23-201ENST00000615195 1269 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L24-201ENST00000617576 1269 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L22-201ENST00000618238 1269 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L20-201ENST00000619712 1269 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L21-201ENST00000622058 1269 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L10-201ENST00000622460 1267 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 DUX4L25-201ENST00000624915 1269 ntBASIC24.67■■□□□ 1.54
CDKN2DP55273 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.67■■□□□ 1.54
CDKN2DP55273 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDKN2DP55273 DUX4L11-201ENST00000611504 1267 ntBASIC24.66■■□□□ 1.54
CDKN2DP55273 DUX4L12-201ENST00000614593 1267 ntBASIC24.66■■□□□ 1.54
CDKN2DP55273 DUX4L14-201ENST00000621227 1267 ntBASIC24.66■■□□□ 1.54
CDKN2DP55273 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDKN2DP55273 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDKN2DP55273 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDKN2DP55273 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDKN2DP55273 ZNRF2P2-203ENST00000454624 420 ntBASIC24.65■■□□□ 1.54
CDKN2DP55273 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDKN2DP55273 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.64■■□□□ 1.54
CDKN2DP55273 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CDKN2DP55273 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDKN2DP55273 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CDKN2DP55273 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDKN2DP55273 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDKN2DP55273 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKN2DP55273 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.63■■□□□ 1.53
CDKN2DP55273 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKN2DP55273 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.62■■□□□ 1.53
CDKN2DP55273 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKN2DP55273 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDKN2DP55273 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDKN2DP55273 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CDKN2DP55273 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.61■■□□□ 1.53
CDKN2DP55273 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.61■■□□□ 1.53
CDKN2DP55273 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDKN2DP55273 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CDKN2DP55273 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDKN2DP55273 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.6■■□□□ 1.53
CDKN2DP55273 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDKN2DP55273 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDKN2DP55273 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDKN2DP55273 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CDKN2DP55273 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKN2DP55273 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKN2DP55273 WHAMMP3-201ENST00000611636 1609 ntBASIC24.58■■□□□ 1.53
CDKN2DP55273 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKN2DP55273 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.58■■□□□ 1.53
CDKN2DP55273 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CDKN2DP55273 AP004609.3-201ENST00000610705 1884 ntBASIC24.58■■□□□ 1.52
CDKN2DP55273 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.57■■□□□ 1.52
CDKN2DP55273 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CDKN2DP55273 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.57■■□□□ 1.52
CDKN2DP55273 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CDKN2DP55273 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.56■■□□□ 1.52
CDKN2DP55273 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDKN2DP55273 ABHD17AP4-201ENST00000411545 909 ntBASIC24.55■■□□□ 1.52
CDKN2DP55273 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDKN2DP55273 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.55■■□□□ 1.52
CDKN2DP55273 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CDKN2DP55273 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDKN2DP55273 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CDKN2DP55273 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.54■■□□□ 1.52
CDKN2DP55273 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CDKN2DP55273 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.54■■□□□ 1.52
CDKN2DP55273 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDKN2DP55273 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.53■■□□□ 1.52
CDKN2DP55273 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CDKN2DP55273 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDKN2DP55273 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.53■■□□□ 1.52
CDKN2DP55273 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDKN2DP55273 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDKN2DP55273 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDKN2DP55273 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.52■■□□□ 1.52
CDKN2DP55273 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.52■■□□□ 1.52
CDKN2DP55273 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.52■■□□□ 1.52
CDKN2DP55273 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDKN2DP55273 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDKN2DP55273 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CDKN2DP55273 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.51■■□□□ 1.51
CDKN2DP55273 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.51■■□□□ 1.51
CDKN2DP55273 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDKN2DP55273 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDKN2DP55273 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDKN2DP55273 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDKN2DP55273 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDKN2DP55273 AC091060.1-201ENST00000623524 1766 ntBASIC24.49■■□□□ 1.51
CDKN2DP55273 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CDKN2DP55273 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms