Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RAB40ALP0C0E4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.58■■□□□ 1.36
RAB40ALP0C0E4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB40ALP0C0E4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB40ALP0C0E4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.56■■□□□ 1.36
RAB40ALP0C0E4 AC018358.1-201ENST00000631079 1402 ntBASIC23.56■■□□□ 1.36
RAB40ALP0C0E4 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.56■■□□□ 1.36
RAB40ALP0C0E4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.56■■□□□ 1.36
RAB40ALP0C0E4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
RAB40ALP0C0E4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAB40ALP0C0E4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAB40ALP0C0E4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAB40ALP0C0E4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RAB40ALP0C0E4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAB40ALP0C0E4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RAB40ALP0C0E4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RAB40ALP0C0E4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.53■■□□□ 1.36
RAB40ALP0C0E4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.53■■□□□ 1.36
RAB40ALP0C0E4 AP002414.2-202ENST00000590929 1450 ntBASIC23.53■■□□□ 1.36
RAB40ALP0C0E4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.53■■□□□ 1.36
RAB40ALP0C0E4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAB40ALP0C0E4 AL359258.2-201ENST00000564063 1566 ntBASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.52■■□□□ 1.36
RAB40ALP0C0E4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.51■■□□□ 1.35
RAB40ALP0C0E4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RAB40ALP0C0E4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAB40ALP0C0E4 AC007029.1-201ENST00000604183 313 ntBASIC23.51■■□□□ 1.35
RAB40ALP0C0E4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RAB40ALP0C0E4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB40ALP0C0E4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAB40ALP0C0E4 KRT18P60-201ENST00000312876 1297 ntBASIC23.5■■□□□ 1.35
RAB40ALP0C0E4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
RAB40ALP0C0E4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAB40ALP0C0E4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAB40ALP0C0E4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.49■■□□□ 1.35
RAB40ALP0C0E4 AL033527.3-201ENST00000566366 1196 ntBASIC23.49■■□□□ 1.35
RAB40ALP0C0E4 SMPD5-203ENST00000639008 1464 ntBASIC23.49■■□□□ 1.35
RAB40ALP0C0E4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.48■■□□□ 1.35
RAB40ALP0C0E4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAB40ALP0C0E4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAB40ALP0C0E4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 TSPY13P-201ENST00000338964 914 ntBASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 AC139426.1-201ENST00000568218 2529 ntBASIC23.46■■□□□ 1.35
RAB40ALP0C0E4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
RAB40ALP0C0E4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB40ALP0C0E4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB40ALP0C0E4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB40ALP0C0E4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB40ALP0C0E4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RAB40ALP0C0E4 AC004987.1-201ENST00000428627 508 ntBASIC23.44■■□□□ 1.34
RAB40ALP0C0E4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.44■■□□□ 1.34
RAB40ALP0C0E4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAB40ALP0C0E4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
RAB40ALP0C0E4 ATP5G2P3-201ENST00000429083 425 ntBASIC23.43■■□□□ 1.34
RAB40ALP0C0E4 AC025884.2-201ENST00000553429 711 ntBASIC23.43■■□□□ 1.34
RAB40ALP0C0E4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.43■■□□□ 1.34
RAB40ALP0C0E4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB40ALP0C0E4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB40ALP0C0E4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.41■■□□□ 1.34
RAB40ALP0C0E4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 AC133552.2-201ENST00000619106 1032 ntBASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 AC009831.1-201ENST00000580420 1582 ntBASIC23.4■■□□□ 1.34
RAB40ALP0C0E4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms