Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.48■■■□□ 2.79
PTCD1O75127 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
PTCD1O75127 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.47■■■□□ 2.79
PTCD1O75127 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PTCD1O75127 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
PTCD1O75127 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PTCD1O75127 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PTCD1O75127 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PTCD1O75127 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.45■■■□□ 2.79
PTCD1O75127 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.78
PTCD1O75127 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PTCD1O75127 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.44■■■□□ 2.78
PTCD1O75127 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.44■■■□□ 2.78
PTCD1O75127 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.44■■■□□ 2.78
PTCD1O75127 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
PTCD1O75127 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
PTCD1O75127 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
PTCD1O75127 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.43■■■□□ 2.78
PTCD1O75127 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.43■■■□□ 2.78
PTCD1O75127 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
PTCD1O75127 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.42■■■□□ 2.78
PTCD1O75127 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
PTCD1O75127 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.41■■■□□ 2.78
PTCD1O75127 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
PTCD1O75127 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.41■■■□□ 2.78
PTCD1O75127 AC026202.3-201ENST00000600805 1127 ntBASIC32.41■■■□□ 2.78
PTCD1O75127 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
PTCD1O75127 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.4■■■□□ 2.78
PTCD1O75127 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PTCD1O75127 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.4■■■□□ 2.78
PTCD1O75127 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
PTCD1O75127 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PTCD1O75127 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.4■■■□□ 2.78
PTCD1O75127 ABCB10P3-201ENST00000561950 2166 ntBASIC32.39■■■□□ 2.78
PTCD1O75127 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
PTCD1O75127 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.39■■■□□ 2.78
PTCD1O75127 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
PTCD1O75127 AL139393.2-201ENST00000608721 2025 ntBASIC32.38■■■□□ 2.77
PTCD1O75127 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.38■■■□□ 2.77
PTCD1O75127 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.38■■■□□ 2.77
PTCD1O75127 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
PTCD1O75127 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
PTCD1O75127 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.36■■■□□ 2.77
PTCD1O75127 AC025884.2-201ENST00000553429 711 ntBASIC32.36■■■□□ 2.77
PTCD1O75127 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
PTCD1O75127 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
PTCD1O75127 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PTCD1O75127 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.34■■■□□ 2.77
PTCD1O75127 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PTCD1O75127 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
PTCD1O75127 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.33■■■□□ 2.77
PTCD1O75127 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
PTCD1O75127 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
PTCD1O75127 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
PTCD1O75127 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.33■■■□□ 2.77
PTCD1O75127 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PTCD1O75127 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.32■■■□□ 2.76
PTCD1O75127 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTCD1O75127 RP9P-202ENST00000450133 1212 ntBASIC32.3■■■□□ 2.76
PTCD1O75127 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTCD1O75127 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTCD1O75127 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTCD1O75127 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PTCD1O75127 DUX4L9-201ENST00000449051 1259 ntBASIC32.29■■■□□ 2.76
PTCD1O75127 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PTCD1O75127 AC093536.1-201ENST00000569153 554 ntBASIC32.29■■■□□ 2.76
PTCD1O75127 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.29■■■□□ 2.76
PTCD1O75127 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PTCD1O75127 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PTCD1O75127 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.27■■■□□ 2.76
PTCD1O75127 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.76
PTCD1O75127 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PTCD1O75127 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PTCD1O75127 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PTCD1O75127 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
PTCD1O75127 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
PTCD1O75127 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.25■■■□□ 2.75
PTCD1O75127 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTCD1O75127 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.24■■■□□ 2.75
PTCD1O75127 SPCS2P3-201ENST00000500401 656 ntBASIC32.24■■■□□ 2.75
PTCD1O75127 RAP2CP1-202ENST00000605179 643 ntBASIC32.24■■■□□ 2.75
PTCD1O75127 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTCD1O75127 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.23■■■□□ 2.75
PTCD1O75127 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
PTCD1O75127 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTCD1O75127 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.22■■■□□ 2.75
PTCD1O75127 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.22■■■□□ 2.75
PTCD1O75127 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.21■■■□□ 2.75
PTCD1O75127 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PTCD1O75127 ABCB10P1-201ENST00000614297 2181 ntBASIC32.2■■■□□ 2.75
PTCD1O75127 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
PTCD1O75127 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
PTCD1O75127 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
PTCD1O75127 AP002414.2-202ENST00000590929 1450 ntBASIC32.2■■■□□ 2.75
PTCD1O75127 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.2■■■□□ 2.74
PTCD1O75127 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.2■■■□□ 2.74
PTCD1O75127 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PTCD1O75127 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PTCD1O75127 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PTCD1O75127 AL451085.2-201ENST00000605085 799 ntBASIC32.18■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms