Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AC022413.1-201ENST00000624602 984 ntBASIC32.07■■■□□ 2.72
ABCC4O15439 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
ABCC4O15439 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
ABCC4O15439 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
ABCC4O15439 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCC4O15439 BX255925.1-201ENST00000566954 1854 ntBASIC32.06■■■□□ 2.72
ABCC4O15439 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ABCC4O15439 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.05■■■□□ 2.72
ABCC4O15439 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ABCC4O15439 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.04■■■□□ 2.72
ABCC4O15439 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ABCC4O15439 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ABCC4O15439 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCC4O15439 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ABCC4O15439 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.03■■■□□ 2.72
ABCC4O15439 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ABCC4O15439 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.02■■■□□ 2.72
ABCC4O15439 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ABCC4O15439 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.02■■■□□ 2.72
ABCC4O15439 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
ABCC4O15439 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.72
ABCC4O15439 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
ABCC4O15439 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC32■■■□□ 2.71
ABCC4O15439 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ABCC4O15439 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ABCC4O15439 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
ABCC4O15439 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
ABCC4O15439 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.97■■■□□ 2.71
ABCC4O15439 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ABCC4O15439 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
ABCC4O15439 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.97■■■□□ 2.71
ABCC4O15439 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.97■■■□□ 2.71
ABCC4O15439 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.97■■■□□ 2.71
ABCC4O15439 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ABCC4O15439 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
ABCC4O15439 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
ABCC4O15439 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ABCC4O15439 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
ABCC4O15439 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCC4O15439 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
ABCC4O15439 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCC4O15439 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCC4O15439 NTF6A-201ENST00000591175 560 ntBASIC31.93■■■□□ 2.7
ABCC4O15439 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.92■■■□□ 2.7
ABCC4O15439 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ABCC4O15439 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ABCC4O15439 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCC4O15439 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
ABCC4O15439 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCC4O15439 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCC4O15439 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
ABCC4O15439 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCC4O15439 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
ABCC4O15439 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.9■■■□□ 2.7
ABCC4O15439 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
ABCC4O15439 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
ABCC4O15439 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
ABCC4O15439 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.89■■■□□ 2.7
ABCC4O15439 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
ABCC4O15439 AC148477.6-201ENST00000623746 465 ntBASIC31.89■■■□□ 2.7
ABCC4O15439 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.88■■■□□ 2.69
ABCC4O15439 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ABCC4O15439 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ABCC4O15439 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
ABCC4O15439 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
ABCC4O15439 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ABCC4O15439 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ABCC4O15439 AC060814.1-201ENST00000554326 538 ntBASIC31.86■■■□□ 2.69
ABCC4O15439 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.86■■■□□ 2.69
ABCC4O15439 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ABCC4O15439 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ABCC4O15439 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
ABCC4O15439 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
ABCC4O15439 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ABCC4O15439 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.84■■■□□ 2.69
ABCC4O15439 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ABCC4O15439 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.82■■■□□ 2.69
ABCC4O15439 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCC4O15439 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCC4O15439 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCC4O15439 AC012354.3-201ENST00000623734 483 ntBASIC31.81■■■□□ 2.68
ABCC4O15439 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ABCC4O15439 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ABCC4O15439 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.79■■■□□ 2.68
ABCC4O15439 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ABCC4O15439 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ABCC4O15439 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ABCC4O15439 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
ABCC4O15439 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ABCC4O15439 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCC4O15439 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCC4O15439 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCC4O15439 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCC4O15439 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCC4O15439 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
ABCC4O15439 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.77■■■□□ 2.68
ABCC4O15439 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.77■■■□□ 2.68
ABCC4O15439 MIR219A2-201ENST00000608502 1504 ntBASIC31.76■■■□□ 2.68
ABCC4O15439 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
ABCC4O15439 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms