Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
SPDYE3A6NKU9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.6■■■□□ 2.17
SPDYE3A6NKU9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.6■■■□□ 2.17
SPDYE3A6NKU9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.6■■■□□ 2.17
SPDYE3A6NKU9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SPDYE3A6NKU9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.59■■■□□ 2.17
SPDYE3A6NKU9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.59■■■□□ 2.17
SPDYE3A6NKU9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SPDYE3A6NKU9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 AC060814.1-201ENST00000554326 538 ntBASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPDYE3A6NKU9 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.57■■■□□ 2.16
SPDYE3A6NKU9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SPDYE3A6NKU9 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.57■■■□□ 2.16
SPDYE3A6NKU9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.57■■■□□ 2.16
SPDYE3A6NKU9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
SPDYE3A6NKU9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPDYE3A6NKU9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SPDYE3A6NKU9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.55■■■□□ 2.16
SPDYE3A6NKU9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SPDYE3A6NKU9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPDYE3A6NKU9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
SPDYE3A6NKU9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SPDYE3A6NKU9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SPDYE3A6NKU9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPDYE3A6NKU9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
SPDYE3A6NKU9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
SPDYE3A6NKU9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPDYE3A6NKU9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPDYE3A6NKU9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.53■■■□□ 2.16
SPDYE3A6NKU9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.53■■■□□ 2.16
SPDYE3A6NKU9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SPDYE3A6NKU9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPDYE3A6NKU9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPDYE3A6NKU9 RNF126P1-201ENST00000567452 1320 ntBASIC28.51■■■□□ 2.15
SPDYE3A6NKU9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SPDYE3A6NKU9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPDYE3A6NKU9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPDYE3A6NKU9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
SPDYE3A6NKU9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
SPDYE3A6NKU9 AL359258.2-201ENST00000564063 1566 ntBASIC28.5■■■□□ 2.15
SPDYE3A6NKU9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SPDYE3A6NKU9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SPDYE3A6NKU9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
SPDYE3A6NKU9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SPDYE3A6NKU9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SPDYE3A6NKU9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SPDYE3A6NKU9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
SPDYE3A6NKU9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPDYE3A6NKU9 RARRES2P2-201ENST00000394842 485 ntBASIC28.48■■■□□ 2.15
SPDYE3A6NKU9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPDYE3A6NKU9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SPDYE3A6NKU9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPDYE3A6NKU9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPDYE3A6NKU9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.47■■■□□ 2.15
SPDYE3A6NKU9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPDYE3A6NKU9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SPDYE3A6NKU9 LINC01003-201ENST00000564834 1764 ntBASIC28.46■■■□□ 2.15
SPDYE3A6NKU9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
SPDYE3A6NKU9 AC142086.6-201ENST00000621154 1765 ntBASIC28.45■■■□□ 2.14
SPDYE3A6NKU9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SPDYE3A6NKU9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPDYE3A6NKU9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.43■■■□□ 2.14
SPDYE3A6NKU9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPDYE3A6NKU9 AC092296.2-201ENST00000589470 999 ntBASIC28.43■■■□□ 2.14
SPDYE3A6NKU9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPDYE3A6NKU9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SPDYE3A6NKU9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SPDYE3A6NKU9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.41■■■□□ 2.14
SPDYE3A6NKU9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
SPDYE3A6NKU9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.4■■■□□ 2.14
SPDYE3A6NKU9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.4■■■□□ 2.14
SPDYE3A6NKU9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.39■■■□□ 2.13
SPDYE3A6NKU9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 AL157400.5-201ENST00000507624 621 ntBASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SPDYE3A6NKU9 WHAMMP3-201ENST00000611636 1609 ntBASIC28.37■■■□□ 2.13
SPDYE3A6NKU9 ECEL1P2-201ENST00000461596 1295 ntBASIC28.37■■■□□ 2.13
SPDYE3A6NKU9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE3A6NKU9 BX255925.1-201ENST00000566954 1854 ntBASIC28.36■■■□□ 2.13
SPDYE3A6NKU9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE3A6NKU9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE3A6NKU9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE3A6NKU9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.36■■■□□ 2.13
SPDYE3A6NKU9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.35■■■□□ 2.13
SPDYE3A6NKU9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPDYE3A6NKU9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SPDYE3A6NKU9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPDYE3A6NKU9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms