Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 HK1-207ENST00000450646 739 ntTSL 53.9□□□□□ -1.793e-11■□□□□ 10.2
SUB1P53999 HK1-210ENST00000476368 605 ntTSL 33.86□□□□□ -1.793e-11■□□□□ 10.2
SUB1P53999 HK1-208ENST00000464803 450 ntTSL 1 (best)3.21□□□□□ -1.93e-11■□□□□ 10.2
SUB1P53999 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.822e-7■□□□□ 10.2
SUB1P53999 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC9.38□□□□□ -0.912e-7■□□□□ 10.2
SUB1P53999 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC8.95□□□□□ -0.982e-7■□□□□ 10.2
SUB1P53999 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC8.18□□□□□ -1.12e-7■□□□□ 10.2
SUB1P53999 HNRNPC-232ENST00000557442 1308 ntTSL 28.1□□□□□ -1.112e-7■□□□□ 10.2
SUB1P53999 HNRNPC-231ENST00000557336 580 ntTSL 38.04□□□□□ -1.122e-7■□□□□ 10.2
SUB1P53999 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC8.04□□□□□ -1.122e-7■□□□□ 10.2
SUB1P53999 HNRNPC-213ENST00000554891 644 ntTSL 57.79□□□□□ -1.162e-7■□□□□ 10.2
SUB1P53999 HNRNPC-224ENST00000556226 629 ntTSL 57.3□□□□□ -1.242e-7■□□□□ 10.2
SUB1P53999 HNRNPC-228ENST00000557033 760 ntTSL 37.3□□□□□ -1.242e-7■□□□□ 10.2
SUB1P53999 HNRNPC-209ENST00000554383 1039 ntTSL 57.23□□□□□ -1.252e-7■□□□□ 10.2
SUB1P53999 HNRNPC-218ENST00000555215 781 ntTSL 57.23□□□□□ -1.252e-7■□□□□ 10.2
SUB1P53999 HNRNPC-216ENST00000555137 789 ntTSL 36.99□□□□□ -1.292e-7■□□□□ 10.2
SUB1P53999 HNRNPC-207ENST00000553614 604 ntTSL 56.41□□□□□ -1.382e-7■□□□□ 10.2
SUB1P53999 HNRNPC-212ENST00000554539 748 ntTSL 55.95□□□□□ -1.462e-7■□□□□ 10.2
SUB1P53999 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.75□□□□□ -1.492e-7■□□□□ 10.2
SUB1P53999 HNRNPC-215ENST00000555127 929 ntTSL 24.9□□□□□ -1.632e-7■□□□□ 10.2
SUB1P53999 HNRNPC-233ENST00000557768 599 ntTSL 33.77□□□□□ -1.812e-7■□□□□ 10.2
SUB1P53999 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.086e-7■□□□□ 10.1
SUB1P53999 USP7-208ENST00000563961 4533 ntTSL 512.18□□□□□ -0.466e-7■□□□□ 10.1
SUB1P53999 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.48□□□□□ -1.696e-7■□□□□ 10.1
SUB1P53999 EML3-207ENST00000460939 1770 ntTSL 518.47■□□□□ 0.552e-6■□□□□ 10.1
SUB1P53999 EML3-206ENST00000439994 671 ntTSL 518.11■□□□□ 0.492e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-214ENST00000520485 1548 ntTSL 217.89■□□□□ 0.452e-6■□□□□ 10.1
SUB1P53999 CPSF1-214ENST00000622776 1029 ntTSL 517.25■□□□□ 0.352e-6■□□□□ 10.1
SUB1P53999 DAZAP1-204ENST00000586579 619 ntTSL 317.09■□□□□ 0.332e-6■□□□□ 10.1
SUB1P53999 TOP3B-205ENST00000434517 736 ntTSL 516.55■□□□□ 0.242e-6■□□□□ 10.1
SUB1P53999 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.69□□□□□ -0.062e-6■□□□□ 10.1
SUB1P53999 EML3-203ENST00000394776 2818 ntTSL 214.56□□□□□ -0.082e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-217ENST00000523114 579 ntTSL 414.52□□□□□ -0.092e-6■□□□□ 10.1
SUB1P53999 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-6■□□□□ 10.1
SUB1P53999 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.49□□□□□ -0.092e-6■□□□□ 10.1
SUB1P53999 CDC25B-206ENST00000467519 1960 ntTSL 1 (best)14.47□□□□□ -0.092e-6■□□□□ 10.1
SUB1P53999 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.29□□□□□ -0.122e-6■□□□□ 10.1
SUB1P53999 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.25□□□□□ -0.132e-6■□□□□ 10.1
SUB1P53999 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.25□□□□□ -0.132e-6■□□□□ 10.1
SUB1P53999 MTCH2-203ENST00000530428 930 ntTSL 514.25□□□□□ -0.132e-6■□□□□ 10.1
SUB1P53999 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.152e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-211ENST00000519531 1490 ntTSL 313.92□□□□□ -0.182e-6■□□□□ 10.1
SUB1P53999 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.22e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.34□□□□□ -0.272e-6■□□□□ 10.1
SUB1P53999 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.29□□□□□ -0.282e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.292e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.95□□□□□ -0.342e-6■□□□□ 10.1
SUB1P53999 RNPS1-206ENST00000562205 2223 ntTSL 212.85□□□□□ -0.352e-6■□□□□ 10.1
SUB1P53999 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.352e-6■□□□□ 10.1
SUB1P53999 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.67□□□□□ -0.382e-6■□□□□ 10.1
SUB1P53999 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.34□□□□□ -0.432e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-215ENST00000522403 995 ntTSL 512.23□□□□□ -0.452e-6■□□□□ 10.1
SUB1P53999 TOP3B-217ENST00000489581 789 ntTSL 212.19□□□□□ -0.462e-6■□□□□ 10.1
SUB1P53999 MTCH2-204ENST00000533571 535 ntTSL 212.04□□□□□ -0.482e-6■□□□□ 10.1
SUB1P53999 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.482e-6■□□□□ 10.1
SUB1P53999 TOP3B-211ENST00000449704 543 ntTSL 312.02□□□□□ -0.492e-6■□□□□ 10.1
SUB1P53999 DAZAP1-210ENST00000592453 1021 ntTSL 511.94□□□□□ -0.52e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.512e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.552e-6■□□□□ 10.1
SUB1P53999 EML3-213ENST00000494448 3665 ntTSL 211.58□□□□□ -0.562e-6■□□□□ 10.1
SUB1P53999 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.562e-6■□□□□ 10.1
SUB1P53999 CPSF1-208ENST00000532560 701 ntTSL 311.44□□□□□ -0.582e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-216ENST00000522959 556 ntTSL 211.4□□□□□ -0.582e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-221ENST00000549047 1040 ntTSL 511.31□□□□□ -0.62e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.19□□□□□ -0.622e-6■□□□□ 10.1
SUB1P53999 TOP3B-204ENST00000430142 582 ntTSL 210.87□□□□□ -0.672e-6■□□□□ 10.1
SUB1P53999 DAZAP1-209ENST00000590419 508 ntTSL 310.77□□□□□ -0.692e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-218ENST00000523460 572 ntTSL 410.55□□□□□ -0.722e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-219ENST00000524192 980 ntTSL 210.39□□□□□ -0.752e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-206ENST00000518601 905 ntTSL 510.24□□□□□ -0.772e-6■□□□□ 10.1
SUB1P53999 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.812e-6■□□□□ 10.1
SUB1P53999 CYC1-202ENST00000525122 543 ntTSL 29.76□□□□□ -0.852e-6■□□□□ 10.1
SUB1P53999 NUP188-201ENST00000372577 5689 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.912e-6■□□□□ 10.1
SUB1P53999 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.912e-6■□□□□ 10.1
SUB1P53999 TOP3B-207ENST00000437103 571 ntTSL 49.35□□□□□ -0.912e-6■□□□□ 10.1
SUB1P53999 ARFGAP1-223ENST00000550188 572 ntTSL 59.17□□□□□ -0.942e-6■□□□□ 10.1
SUB1P53999 TOP3B-203ENST00000424393 824 ntTSL 58.29□□□□□ -1.082e-6■□□□□ 10.1
SUB1P53999 TOP3B-212ENST00000456075 561 ntTSL 47.93□□□□□ -1.142e-6■□□□□ 10.1
SUB1P53999 SF3B3-211ENST00000568291 1067 ntTSL 27.11□□□□□ -1.271e-12■□□□□ 10.1
SUB1P53999 TOP3B-209ENST00000442653 400 ntTSL 35.98□□□□□ -1.452e-6■□□□□ 10.1
SUB1P53999 UBR4-212ENST00000475973 600 ntTSL 35.44□□□□□ -1.542e-6■□□□□ 10.1
SUB1P53999 SF3B3-209ENST00000567635 630 ntTSL 55.18□□□□□ -1.581e-12■□□□□ 10.1
SUB1P53999 TOP3B-208ENST00000437929 550 ntTSL 44.75□□□□□ -1.652e-6■□□□□ 10.1
SUB1P53999 DLAT-205ENST00000533297 2118 ntTSL 213.77□□□□□ -0.213e-6■□□□□ 10.1
SUB1P53999 SEC13-218ENST00000490283 740 ntTSL 213.14□□□□□ -0.318e-20■□□□□ 10
SUB1P53999 BSDC1-208ENST00000474414 978 ntTSL 515.76■□□□□ 0.112e-6■□□□□ 10
SUB1P53999 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.67■□□□□ 0.12e-6■□□□□ 10
SUB1P53999 TCF25-207ENST00000562256 1879 ntTSL 1 (best)14.93□□□□□ -0.022e-6■□□□□ 10
SUB1P53999 TCF25-213ENST00000564957 459 ntTSL 314.77□□□□□ -0.052e-6■□□□□ 10
SUB1P53999 TCF25-216ENST00000565860 437 ntTSL 314.77□□□□□ -0.052e-6■□□□□ 10
SUB1P53999 TCF25-218ENST00000566283 515 ntTSL 214.77□□□□□ -0.052e-6■□□□□ 10
SUB1P53999 FIS1-206ENST00000473527 1005 ntTSL 1 (best)14.09□□□□□ -0.152e-6■□□□□ 10
SUB1P53999 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.09□□□□□ -0.152e-6■□□□□ 10
SUB1P53999 BSDC1-202ENST00000373520 1630 ntTSL 213.24□□□□□ -0.292e-6■□□□□ 10
SUB1P53999 TCF25-220ENST00000567171 1535 ntTSL 213.02□□□□□ -0.332e-6■□□□□ 10
SUB1P53999 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13□□□□□ -0.332e-6■□□□□ 10
SUB1P53999 BSDC1-213ENST00000530753 571 ntTSL 412.89□□□□□ -0.352e-6■□□□□ 10
SUB1P53999 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.352e-6■□□□□ 10
SUB1P53999 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.88□□□□□ -0.352e-6■□□□□ 10
SUB1P53999 TCF25-226ENST00000640279 2688 ntTSL 512.76□□□□□ -0.372e-6■□□□□ 10
Retrieved 100 of 11,644 protein–RNA pairs in 223 ms