RNA–Protein interactions for RNA: ENST00000522403.6

ARFGAP1-215, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-215ENST00000522403 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
ARFGAP1-215ENST00000522403 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
ARFGAP1-215ENST00000522403 ABCC9O60706 1549 aa34.03■■■■□ 3.04
ARFGAP1-215ENST00000522403 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
ARFGAP1-215ENST00000522403 RB1CC1Q8TDY2 1594 aa32.62■■■□□ 2.81
ARFGAP1-215ENST00000522403 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
ARFGAP1-215ENST00000522403 NACADO15069 1562 aa32.58■■■□□ 2.81
ARFGAP1-215ENST00000522403 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
ARFGAP1-215ENST00000522403 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
ARFGAP1-215ENST00000522403 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
ARFGAP1-215ENST00000522403 PABPN1Q86U42 306 aaKnown RBP eCLIP31.84■■■□□ 2.69
ARFGAP1-215ENST00000522403 SCRIBQ14160 1630 aa31.8■■■□□ 2.68
ARFGAP1-215ENST00000522403 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
ARFGAP1-215ENST00000522403 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
ARFGAP1-215ENST00000522403 SHROOM4Q9ULL8 1493 aa31.18■■■□□ 2.58
ARFGAP1-215ENST00000522403 EIF4G1Q04637 1599 aaKnown RBP30.85■■■□□ 2.53
ARFGAP1-215ENST00000522403 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
ARFGAP1-215ENST00000522403 CECR2Q9BXF3 1484 aa30.57■■■□□ 2.48
ARFGAP1-215ENST00000522403 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
ARFGAP1-215ENST00000522403 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
ARFGAP1-215ENST00000522403 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
ARFGAP1-215ENST00000522403 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
ARFGAP1-215ENST00000522403 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
ARFGAP1-215ENST00000522403 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
ARFGAP1-215ENST00000522403 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
ARFGAP1-215ENST00000522403 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
ARFGAP1-215ENST00000522403 WIZO95785 1651 aa29.91■■■□□ 2.38
ARFGAP1-215ENST00000522403 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
ARFGAP1-215ENST00000522403 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
ARFGAP1-215ENST00000522403 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.32
ARFGAP1-215ENST00000522403 NESP48681 1621 aa29.49■■■□□ 2.31
ARFGAP1-215ENST00000522403 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
ARFGAP1-215ENST00000522403 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
ARFGAP1-215ENST00000522403 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
ARFGAP1-215ENST00000522403 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
ARFGAP1-215ENST00000522403 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
ARFGAP1-215ENST00000522403 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
ARFGAP1-215ENST00000522403 CFTRP13569 1480 aa29.06■■■□□ 2.24
ARFGAP1-215ENST00000522403 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
ARFGAP1-215ENST00000522403 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
ARFGAP1-215ENST00000522403 FANCD2Q9BXW9 1451 aa28.93■■■□□ 2.22
ARFGAP1-215ENST00000522403 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
ARFGAP1-215ENST00000522403 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
ARFGAP1-215ENST00000522403 CUX2O14529 1486 aa28.84■■■□□ 2.21
ARFGAP1-215ENST00000522403 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
ARFGAP1-215ENST00000522403 WDR62O43379 1518 aa28.71■■■□□ 2.19
ARFGAP1-215ENST00000522403 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
ARFGAP1-215ENST00000522403 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
ARFGAP1-215ENST00000522403 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
ARFGAP1-215ENST00000522403 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
ARFGAP1-215ENST00000522403 CUX1P39880 1505 aa28.33■■■□□ 2.13
ARFGAP1-215ENST00000522403 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
ARFGAP1-215ENST00000522403 IFT140Q96RY7 1462 aa28.23■■■□□ 2.11
ARFGAP1-215ENST00000522403 ZNF608Q9ULD9 1512 aaPredicted RBP28.22■■■□□ 2.11
ARFGAP1-215ENST00000522403 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
ARFGAP1-215ENST00000522403 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
ARFGAP1-215ENST00000522403 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
ARFGAP1-215ENST00000522403 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
ARFGAP1-215ENST00000522403 SOGA1O94964 1423 aa28.12■■■□□ 2.09
ARFGAP1-215ENST00000522403 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
ARFGAP1-215ENST00000522403 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
ARFGAP1-215ENST00000522403 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
ARFGAP1-215ENST00000522403 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.085e-7■■■■□ 22.2
ARFGAP1-215ENST00000522403 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
ARFGAP1-215ENST00000522403 TDRD9Q8NDG6 1382 aaKnown RBP28.01■■■□□ 2.07
ARFGAP1-215ENST00000522403 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
ARFGAP1-215ENST00000522403 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
ARFGAP1-215ENST00000522403 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
ARFGAP1-215ENST00000522403 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
ARFGAP1-215ENST00000522403 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
ARFGAP1-215ENST00000522403 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
ARFGAP1-215ENST00000522403 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
ARFGAP1-215ENST00000522403 GRIN2BQ13224 1484 aa27.76■■■□□ 2.03
ARFGAP1-215ENST00000522403 CHD1O14646 1710 aa27.74■■■□□ 2.03
ARFGAP1-215ENST00000522403 FBLN2P98095 1184 aa27.71■■■□□ 2.03
ARFGAP1-215ENST00000522403 OSCARQ8IYS5 282 aa27.7■■■□□ 2.02
ARFGAP1-215ENST00000522403 MAGI1Q96QZ7 1491 aaPredicted RBP27.65■■■□□ 2.02
ARFGAP1-215ENST00000522403 CHMP7Q8WUX9 453 aaPredicted RBP27.58■■■□□ 2.01
ARFGAP1-215ENST00000522403 SYNJ2O15056 1496 aa27.57■■■□□ 2
ARFGAP1-215ENST00000522403 ADAMTS12P58397 1594 aa27.53■■■□□ 2
ARFGAP1-215ENST00000522403 TRIM41Q8WV44 630 aa27.52■■■□□ 2
ARFGAP1-215ENST00000522403 ERICH3Q5RHP9 1530 aa27.51■■■□□ 2
ARFGAP1-215ENST00000522403 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
ARFGAP1-215ENST00000522403 FHAD1B1AJZ9 1412 aa27.44■■□□□ 1.98
ARFGAP1-215ENST00000522403 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
ARFGAP1-215ENST00000522403 IGF1RP08069 1367 aa27.42■■□□□ 1.98
ARFGAP1-215ENST00000522403 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
ARFGAP1-215ENST00000522403 CLASP1Q7Z460 1538 aa27.37■■□□□ 1.97
ARFGAP1-215ENST00000522403 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
ARFGAP1-215ENST00000522403 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
ARFGAP1-215ENST00000522403 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
ARFGAP1-215ENST00000522403 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
ARFGAP1-215ENST00000522403 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
ARFGAP1-215ENST00000522403 CUL7Q14999 1698 aa27.3■■□□□ 1.96
ARFGAP1-215ENST00000522403 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
ARFGAP1-215ENST00000522403 NUP160Q12769 1436 aa27.27■■□□□ 1.96
ARFGAP1-215ENST00000522403 CARMIL1Q5VZK9 1371 aa27.25■■□□□ 1.95
ARFGAP1-215ENST00000522403 ERCC6L2Q5T890 1561 aa27.12■■□□□ 1.93
ARFGAP1-215ENST00000522403 ARAP1Q96P48 1450 aa27.11■■□□□ 1.93
ARFGAP1-215ENST00000522403 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms