RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
HNRNPC-212ENST00000554539 ABCC9O60706 1549 aa19.96■□□□□ 0.79
HNRNPC-212ENST00000554539 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
HNRNPC-212ENST00000554539 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
HNRNPC-212ENST00000554539 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
HNRNPC-212ENST00000554539 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
HNRNPC-212ENST00000554539 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
HNRNPC-212ENST00000554539 NACADO15069 1562 aa18.43■□□□□ 0.54
HNRNPC-212ENST00000554539 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
HNRNPC-212ENST00000554539 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
HNRNPC-212ENST00000554539 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
HNRNPC-212ENST00000554539 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
HNRNPC-212ENST00000554539 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
HNRNPC-212ENST00000554539 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
HNRNPC-212ENST00000554539 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
HNRNPC-212ENST00000554539 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
HNRNPC-212ENST00000554539 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
HNRNPC-212ENST00000554539 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
HNRNPC-212ENST00000554539 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
HNRNPC-212ENST00000554539 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
HNRNPC-212ENST00000554539 CUX2O14529 1486 aa17.12■□□□□ 0.33
HNRNPC-212ENST00000554539 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
HNRNPC-212ENST00000554539 NESP48681 1621 aa17.06■□□□□ 0.32
HNRNPC-212ENST00000554539 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
HNRNPC-212ENST00000554539 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
HNRNPC-212ENST00000554539 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
HNRNPC-212ENST00000554539 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
HNRNPC-212ENST00000554539 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
HNRNPC-212ENST00000554539 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
HNRNPC-212ENST00000554539 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
HNRNPC-212ENST00000554539 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
HNRNPC-212ENST00000554539 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
HNRNPC-212ENST00000554539 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
HNRNPC-212ENST00000554539 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
HNRNPC-212ENST00000554539 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
HNRNPC-212ENST00000554539 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
HNRNPC-212ENST00000554539 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
HNRNPC-212ENST00000554539 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
HNRNPC-212ENST00000554539 WIZO95785 1651 aa16.49■□□□□ 0.23
HNRNPC-212ENST00000554539 WDR62O43379 1518 aa16.47■□□□□ 0.23
HNRNPC-212ENST00000554539 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
HNRNPC-212ENST00000554539 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
HNRNPC-212ENST00000554539 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
HNRNPC-212ENST00000554539 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
HNRNPC-212ENST00000554539 CFTRP13569 1480 aa16.29■□□□□ 0.2
HNRNPC-212ENST00000554539 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
HNRNPC-212ENST00000554539 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.19
HNRNPC-212ENST00000554539 CYB5RLQ6IPT4 315 aa16.21■□□□□ 0.19
HNRNPC-212ENST00000554539 RIMBP3CA6NJZ7 1639 aa16.2■□□□□ 0.18
HNRNPC-212ENST00000554539 RIMBP3BA6NNM3 1639 aa16.2■□□□□ 0.18
HNRNPC-212ENST00000554539 RIMBP3Q9UFD9 1639 aa16.2■□□□□ 0.18
HNRNPC-212ENST00000554539 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
HNRNPC-212ENST00000554539 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
HNRNPC-212ENST00000554539 FBLN2P98095 1184 aa16.12■□□□□ 0.17
HNRNPC-212ENST00000554539 ARHGEF11O15085 1522 aa16.12■□□□□ 0.17
HNRNPC-212ENST00000554539 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
HNRNPC-212ENST00000554539 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
HNRNPC-212ENST00000554539 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
HNRNPC-212ENST00000554539 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.162e-7■■■■□ 24.5
HNRNPC-212ENST00000554539 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
HNRNPC-212ENST00000554539 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
HNRNPC-212ENST00000554539 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
HNRNPC-212ENST00000554539 CHD1O14646 1710 aa15.94■□□□□ 0.14
HNRNPC-212ENST00000554539 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
HNRNPC-212ENST00000554539 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
HNRNPC-212ENST00000554539 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
HNRNPC-212ENST00000554539 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
HNRNPC-212ENST00000554539 TARBP1Q13395 1621 aaKnown RBP15.89■□□□□ 0.13
HNRNPC-212ENST00000554539 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
HNRNPC-212ENST00000554539 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
HNRNPC-212ENST00000554539 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
HNRNPC-212ENST00000554539 SOGA1O94964 1423 aa15.85■□□□□ 0.13
HNRNPC-212ENST00000554539 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
HNRNPC-212ENST00000554539 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
HNRNPC-212ENST00000554539 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
HNRNPC-212ENST00000554539 CUX1P39880 1505 aa15.69■□□□□ 0.1
HNRNPC-212ENST00000554539 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
HNRNPC-212ENST00000554539 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
HNRNPC-212ENST00000554539 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
HNRNPC-212ENST00000554539 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
HNRNPC-212ENST00000554539 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
HNRNPC-212ENST00000554539 ERCC6L2Q5T890 1561 aa15.6■□□□□ 0.09
HNRNPC-212ENST00000554539 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
HNRNPC-212ENST00000554539 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
HNRNPC-212ENST00000554539 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
HNRNPC-212ENST00000554539 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
HNRNPC-212ENST00000554539 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
HNRNPC-212ENST00000554539 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
HNRNPC-212ENST00000554539 CEP170Q5SW79 1584 aa15.46■□□□□ 0.07
HNRNPC-212ENST00000554539 NUP160Q12769 1436 aa15.42■□□□□ 0.06
HNRNPC-212ENST00000554539 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
HNRNPC-212ENST00000554539 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
HNRNPC-212ENST00000554539 JPH4Q96JJ6 628 aa15.4■□□□□ 0.06
HNRNPC-212ENST00000554539 PRG4Q92954 1404 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-212ENST00000554539 ADAMTS12P58397 1594 aa15.39■□□□□ 0.05
HNRNPC-212ENST00000554539 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
HNRNPC-212ENST00000554539 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
HNRNPC-212ENST00000554539 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
HNRNPC-212ENST00000554539 KIF13AQ9H1H9 1805 aa15.33■□□□□ 0.04
HNRNPC-212ENST00000554539 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms