RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
TOP3B-212ENST00000456075 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
TOP3B-212ENST00000456075 ABCC9O60706 1549 aa21.78■■□□□ 1.08
TOP3B-212ENST00000456075 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
TOP3B-212ENST00000456075 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
TOP3B-212ENST00000456075 NACADO15069 1562 aa20.89■□□□□ 0.94
TOP3B-212ENST00000456075 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
TOP3B-212ENST00000456075 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
TOP3B-212ENST00000456075 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
TOP3B-212ENST00000456075 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
TOP3B-212ENST00000456075 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
TOP3B-212ENST00000456075 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
TOP3B-212ENST00000456075 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
TOP3B-212ENST00000456075 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
TOP3B-212ENST00000456075 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
TOP3B-212ENST00000456075 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
TOP3B-212ENST00000456075 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
TOP3B-212ENST00000456075 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
TOP3B-212ENST00000456075 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
TOP3B-212ENST00000456075 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
TOP3B-212ENST00000456075 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
TOP3B-212ENST00000456075 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
TOP3B-212ENST00000456075 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
TOP3B-212ENST00000456075 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
TOP3B-212ENST00000456075 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
TOP3B-212ENST00000456075 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
TOP3B-212ENST00000456075 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
TOP3B-212ENST00000456075 WIZO95785 1651 aa19.01■□□□□ 0.63
TOP3B-212ENST00000456075 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
TOP3B-212ENST00000456075 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
TOP3B-212ENST00000456075 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
TOP3B-212ENST00000456075 NESP48681 1621 aa18.81■□□□□ 0.6
TOP3B-212ENST00000456075 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
TOP3B-212ENST00000456075 CADPSQ9ULU8 1353 aa18.73■□□□□ 0.59
TOP3B-212ENST00000456075 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
TOP3B-212ENST00000456075 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
TOP3B-212ENST00000456075 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
TOP3B-212ENST00000456075 CFTRP13569 1480 aa18.58■□□□□ 0.57
TOP3B-212ENST00000456075 CUX2O14529 1486 aa18.58■□□□□ 0.56
TOP3B-212ENST00000456075 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
TOP3B-212ENST00000456075 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
TOP3B-212ENST00000456075 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
TOP3B-212ENST00000456075 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
TOP3B-212ENST00000456075 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
TOP3B-212ENST00000456075 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
TOP3B-212ENST00000456075 WDR62O43379 1518 aa18.39■□□□□ 0.53
TOP3B-212ENST00000456075 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
TOP3B-212ENST00000456075 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
TOP3B-212ENST00000456075 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
TOP3B-212ENST00000456075 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
TOP3B-212ENST00000456075 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
TOP3B-212ENST00000456075 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
TOP3B-212ENST00000456075 CUX1P39880 1505 aa18.04■□□□□ 0.48
TOP3B-212ENST00000456075 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
TOP3B-212ENST00000456075 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
TOP3B-212ENST00000456075 SOGA1O94964 1423 aa18■□□□□ 0.47
TOP3B-212ENST00000456075 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
TOP3B-212ENST00000456075 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
TOP3B-212ENST00000456075 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
TOP3B-212ENST00000456075 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
TOP3B-212ENST00000456075 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
TOP3B-212ENST00000456075 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.468e-7■■■■□ 23.5
TOP3B-212ENST00000456075 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
TOP3B-212ENST00000456075 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
TOP3B-212ENST00000456075 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
TOP3B-212ENST00000456075 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
TOP3B-212ENST00000456075 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
TOP3B-212ENST00000456075 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
TOP3B-212ENST00000456075 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
TOP3B-212ENST00000456075 FBLN2P98095 1184 aa17.81■□□□□ 0.44
TOP3B-212ENST00000456075 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
TOP3B-212ENST00000456075 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
TOP3B-212ENST00000456075 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
TOP3B-212ENST00000456075 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-212ENST00000456075 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
TOP3B-212ENST00000456075 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-212ENST00000456075 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
TOP3B-212ENST00000456075 CHD1O14646 1710 aa17.7■□□□□ 0.42
TOP3B-212ENST00000456075 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
TOP3B-212ENST00000456075 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
TOP3B-212ENST00000456075 KIF27Q86VH2 1401 aa17.62■□□□□ 0.41
TOP3B-212ENST00000456075 ADAMTS12P58397 1594 aa17.59■□□□□ 0.41
TOP3B-212ENST00000456075 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
TOP3B-212ENST00000456075 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
TOP3B-212ENST00000456075 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
TOP3B-212ENST00000456075 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
TOP3B-212ENST00000456075 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
TOP3B-212ENST00000456075 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
TOP3B-212ENST00000456075 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
TOP3B-212ENST00000456075 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
TOP3B-212ENST00000456075 IGF1RP08069 1367 aa17.49■□□□□ 0.39
TOP3B-212ENST00000456075 CUL7Q14999 1698 aa17.47■□□□□ 0.39
TOP3B-212ENST00000456075 NUP160Q12769 1436 aa17.45■□□□□ 0.38
TOP3B-212ENST00000456075 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
TOP3B-212ENST00000456075 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
TOP3B-212ENST00000456075 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
TOP3B-212ENST00000456075 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
TOP3B-212ENST00000456075 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
TOP3B-212ENST00000456075 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
TOP3B-212ENST00000456075 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms