RNA–Protein interactions for RNA: ENST00000523460.5

ARFGAP1-218, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-218ENST00000523460 NISCHQ9Y2I1 1504 aa35.47■■■■□ 3.27
ARFGAP1-218ENST00000523460 ABCC9O60706 1549 aa31.8■■■□□ 2.68
ARFGAP1-218ENST00000523460 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
ARFGAP1-218ENST00000523460 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
ARFGAP1-218ENST00000523460 NACADO15069 1562 aa29.98■■■□□ 2.39
ARFGAP1-218ENST00000523460 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
ARFGAP1-218ENST00000523460 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
ARFGAP1-218ENST00000523460 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
ARFGAP1-218ENST00000523460 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.332e-13■■■□□ 15.6
ARFGAP1-218ENST00000523460 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
ARFGAP1-218ENST00000523460 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
ARFGAP1-218ENST00000523460 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
ARFGAP1-218ENST00000523460 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
ARFGAP1-218ENST00000523460 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
ARFGAP1-218ENST00000523460 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
ARFGAP1-218ENST00000523460 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
ARFGAP1-218ENST00000523460 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
ARFGAP1-218ENST00000523460 CECR2Q9BXF3 1484 aa28.58■■■□□ 2.17
ARFGAP1-218ENST00000523460 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
ARFGAP1-218ENST00000523460 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
ARFGAP1-218ENST00000523460 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
ARFGAP1-218ENST00000523460 SMARCA2P51531 1590 aa27.53■■■□□ 2
ARFGAP1-218ENST00000523460 HMGXB3Q12766 1538 aa27.51■■■□□ 2
ARFGAP1-218ENST00000523460 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
ARFGAP1-218ENST00000523460 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.97
ARFGAP1-218ENST00000523460 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
ARFGAP1-218ENST00000523460 NESP48681 1621 aa27.37■■□□□ 1.97
ARFGAP1-218ENST00000523460 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
ARFGAP1-218ENST00000523460 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
ARFGAP1-218ENST00000523460 CUX2O14529 1486 aa27.27■■□□□ 1.96
ARFGAP1-218ENST00000523460 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
ARFGAP1-218ENST00000523460 THOC2Q8NI27 1593 aaKnown RBP27.07■■□□□ 1.92
ARFGAP1-218ENST00000523460 WIZO95785 1651 aa27.07■■□□□ 1.92
ARFGAP1-218ENST00000523460 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
ARFGAP1-218ENST00000523460 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
ARFGAP1-218ENST00000523460 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
ARFGAP1-218ENST00000523460 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
ARFGAP1-218ENST00000523460 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
ARFGAP1-218ENST00000523460 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
ARFGAP1-218ENST00000523460 TOP2AP11388 1531 aaKnown RBP26.68■■□□□ 1.86
ARFGAP1-218ENST00000523460 WDR62O43379 1518 aa26.65■■□□□ 1.86
ARFGAP1-218ENST00000523460 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
ARFGAP1-218ENST00000523460 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
ARFGAP1-218ENST00000523460 CFTRP13569 1480 aa26.58■■□□□ 1.85
ARFGAP1-218ENST00000523460 URB2Q14146 1524 aaKnown RBP26.43■■□□□ 1.82
ARFGAP1-218ENST00000523460 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
ARFGAP1-218ENST00000523460 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
ARFGAP1-218ENST00000523460 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
ARFGAP1-218ENST00000523460 ZNF608Q9ULD9 1512 aaPredicted RBP26.11■■□□□ 1.77
ARFGAP1-218ENST00000523460 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
ARFGAP1-218ENST00000523460 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
ARFGAP1-218ENST00000523460 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
ARFGAP1-218ENST00000523460 OSCARQ8IYS5 282 aa25.97■■□□□ 1.75
ARFGAP1-218ENST00000523460 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
ARFGAP1-218ENST00000523460 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
ARFGAP1-218ENST00000523460 TARBP1Q13395 1621 aaKnown RBP25.9■■□□□ 1.74
ARFGAP1-218ENST00000523460 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
ARFGAP1-218ENST00000523460 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.735e-7■■■■□ 23.1
ARFGAP1-218ENST00000523460 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
ARFGAP1-218ENST00000523460 RIMBP3CA6NJZ7 1639 aa25.79■■□□□ 1.72
ARFGAP1-218ENST00000523460 RIMBP3BA6NNM3 1639 aa25.79■■□□□ 1.72
ARFGAP1-218ENST00000523460 RIMBP3Q9UFD9 1639 aa25.79■■□□□ 1.72
ARFGAP1-218ENST00000523460 CHD1O14646 1710 aa25.76■■□□□ 1.71
ARFGAP1-218ENST00000523460 CUX1P39880 1505 aa25.73■■□□□ 1.71
ARFGAP1-218ENST00000523460 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
ARFGAP1-218ENST00000523460 ARHGEF11O15085 1522 aa25.69■■□□□ 1.7
ARFGAP1-218ENST00000523460 SOGA1O94964 1423 aa25.67■■□□□ 1.7
ARFGAP1-218ENST00000523460 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
ARFGAP1-218ENST00000523460 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
ARFGAP1-218ENST00000523460 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
ARFGAP1-218ENST00000523460 FBLN2P98095 1184 aa25.57■■□□□ 1.68
ARFGAP1-218ENST00000523460 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
ARFGAP1-218ENST00000523460 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
ARFGAP1-218ENST00000523460 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
ARFGAP1-218ENST00000523460 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
ARFGAP1-218ENST00000523460 MAGI1Q96QZ7 1491 aaPredicted RBP25.44■■□□□ 1.66
ARFGAP1-218ENST00000523460 PBRM1Q86U86 1689 aa25.44■■□□□ 1.66
ARFGAP1-218ENST00000523460 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
ARFGAP1-218ENST00000523460 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
ARFGAP1-218ENST00000523460 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
ARFGAP1-218ENST00000523460 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
ARFGAP1-218ENST00000523460 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
ARFGAP1-218ENST00000523460 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
ARFGAP1-218ENST00000523460 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
ARFGAP1-218ENST00000523460 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
ARFGAP1-218ENST00000523460 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
ARFGAP1-218ENST00000523460 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
ARFGAP1-218ENST00000523460 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
ARFGAP1-218ENST00000523460 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
ARFGAP1-218ENST00000523460 CEP170Q5SW79 1584 aa25.13■■□□□ 1.61
ARFGAP1-218ENST00000523460 ERCC6L2Q5T890 1561 aa25.13■■□□□ 1.61
ARFGAP1-218ENST00000523460 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
ARFGAP1-218ENST00000523460 NUP160Q12769 1436 aa25.08■■□□□ 1.61
ARFGAP1-218ENST00000523460 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
ARFGAP1-218ENST00000523460 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
ARFGAP1-218ENST00000523460 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
ARFGAP1-218ENST00000523460 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
ARFGAP1-218ENST00000523460 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
ARFGAP1-218ENST00000523460 JPH4Q96JJ6 628 aa24.74■■□□□ 1.55
ARFGAP1-218ENST00000523460 IGF1RP08069 1367 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms