RNA–Protein interactions for RNA: ENST00000494448.5

EML3-213, Transcript of echinoderm microtubule associated protein like 3, humanhuman

TSL 2

Gene EML3, Length 3,665 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EML3-213ENST00000494448 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
EML3-213ENST00000494448 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
EML3-213ENST00000494448 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
EML3-213ENST00000494448 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
EML3-213ENST00000494448 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
EML3-213ENST00000494448 HRCP23327 699 aa23.77■■□□□ 1.4
EML3-213ENST00000494448 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
EML3-213ENST00000494448 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
EML3-213ENST00000494448 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
EML3-213ENST00000494448 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
EML3-213ENST00000494448 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
EML3-213ENST00000494448 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
EML3-213ENST00000494448 MYT1Q01538 1121 aa23■■□□□ 1.27
EML3-213ENST00000494448 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
EML3-213ENST00000494448 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
EML3-213ENST00000494448 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.21
EML3-213ENST00000494448 DCAF1Q9Y4B6 1507 aa22.51■■□□□ 1.19
EML3-213ENST00000494448 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
EML3-213ENST00000494448 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
EML3-213ENST00000494448 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
EML3-213ENST00000494448 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
EML3-213ENST00000494448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
EML3-213ENST00000494448 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
EML3-213ENST00000494448 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
EML3-213ENST00000494448 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
EML3-213ENST00000494448 YTHDC1Q96MU7 727 aaKnown RBP22.01■■□□□ 1.11
EML3-213ENST00000494448 GTF3C3Q9Y5Q9 886 aa22.01■■□□□ 1.11
EML3-213ENST00000494448 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
EML3-213ENST00000494448 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
EML3-213ENST00000494448 DIEXFQ68CQ4 756 aaKnown RBP21.91■■□□□ 1.1
EML3-213ENST00000494448 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
EML3-213ENST00000494448 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
EML3-213ENST00000494448 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
EML3-213ENST00000494448 UBTFP17480 764 aaKnown RBP21.53■■□□□ 1.04
EML3-213ENST00000494448 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
EML3-213ENST00000494448 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
EML3-213ENST00000494448 PRKCSHP14314 528 aaPredicted RBP21.48■■□□□ 1.03
EML3-213ENST00000494448 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
EML3-213ENST00000494448 ABCC9O60706 1549 aa21.44■■□□□ 1.02
EML3-213ENST00000494448 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
EML3-213ENST00000494448 MIER1Q8N108 512 aa21.35■■□□□ 1.01
EML3-213ENST00000494448 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
EML3-213ENST00000494448 APLP2Q06481 763 aa21.2■□□□□ 0.99
EML3-213ENST00000494448 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
EML3-213ENST00000494448 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
EML3-213ENST00000494448 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.96
EML3-213ENST00000494448 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
EML3-213ENST00000494448 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
EML3-213ENST00000494448 BCANQ96GW7 911 aa20.99■□□□□ 0.95
EML3-213ENST00000494448 SOGA1O94964 1423 aa20.98■□□□□ 0.95
EML3-213ENST00000494448 WIZO95785 1651 aa20.97■□□□□ 0.95
EML3-213ENST00000494448 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
EML3-213ENST00000494448 ITGAEP38570 1179 aa20.95■□□□□ 0.94
EML3-213ENST00000494448 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
EML3-213ENST00000494448 TNIKQ9UKE5 1360 aa20.82■□□□□ 0.92
EML3-213ENST00000494448 SUPT16HQ9Y5B9 1047 aaKnown RBP20.8■□□□□ 0.92
EML3-213ENST00000494448 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
EML3-213ENST00000494448 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
EML3-213ENST00000494448 CLIP1P30622 1438 aa20.66■□□□□ 0.9
EML3-213ENST00000494448 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
EML3-213ENST00000494448 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
EML3-213ENST00000494448 TSHZ2Q9NRE2 1034 aa20.62■□□□□ 0.89
EML3-213ENST00000494448 FKBP8Q14318 412 aa20.6■□□□□ 0.89
EML3-213ENST00000494448 NEFLP07196 543 aa20.57■□□□□ 0.88
EML3-213ENST00000494448 ANP32EQ9BTT0 268 aa20.57■□□□□ 0.88
EML3-213ENST00000494448 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
EML3-213ENST00000494448 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
EML3-213ENST00000494448 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
EML3-213ENST00000494448 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
EML3-213ENST00000494448 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
EML3-213ENST00000494448 EEA1Q15075 1411 aa20.48■□□□□ 0.87
EML3-213ENST00000494448 NACADO15069 1562 aa20.46■□□□□ 0.87
EML3-213ENST00000494448 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
EML3-213ENST00000494448 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
EML3-213ENST00000494448 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
EML3-213ENST00000494448 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
EML3-213ENST00000494448 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
EML3-213ENST00000494448 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
EML3-213ENST00000494448 FAM50AQ14320 339 aaKnown RBP20.37■□□□□ 0.85
EML3-213ENST00000494448 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
EML3-213ENST00000494448 RAPGEF2Q9Y4G8 1499 aa20.34■□□□□ 0.85
EML3-213ENST00000494448 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.84
EML3-213ENST00000494448 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
EML3-213ENST00000494448 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
EML3-213ENST00000494448 RBM19Q9Y4C8 960 aaKnown RBP20.24■□□□□ 0.83
EML3-213ENST00000494448 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
EML3-213ENST00000494448 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
EML3-213ENST00000494448 ANP32CO43423 234 aa20.22■□□□□ 0.83
EML3-213ENST00000494448 CNGB1Q14028 1251 aaPredicted RBP20.21■□□□□ 0.83
EML3-213ENST00000494448 KIF21BO75037 1637 aa20.13■□□□□ 0.81
EML3-213ENST00000494448 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
EML3-213ENST00000494448 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
EML3-213ENST00000494448 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
EML3-213ENST00000494448 RAB3GAP2Q9H2M9 1393 aa20.09■□□□□ 0.81
EML3-213ENST00000494448 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
EML3-213ENST00000494448 SLC24A1O60721 1099 aa20.06■□□□□ 0.8
EML3-213ENST00000494448 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
EML3-213ENST00000494448 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
EML3-213ENST00000494448 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
EML3-213ENST00000494448 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms