RNA–Protein interactions for RNA: ENST00000344836.8

USP7-201, Transcript of ubiquitin specific peptidase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP7, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-201ENST00000344836 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.35
USP7-201ENST00000344836 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
USP7-201ENST00000344836 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
USP7-201ENST00000344836 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
USP7-201ENST00000344836 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
USP7-201ENST00000344836 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.99
USP7-201ENST00000344836 PELP1Q8IZL8 1130 aaKnown RBP27.31■■□□□ 1.96
USP7-201ENST00000344836 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
USP7-201ENST00000344836 APLP2Q06481 763 aa27.1■■□□□ 1.93
USP7-201ENST00000344836 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
USP7-201ENST00000344836 ZEB1P37275 1124 aaPredicted RBP26.9■■□□□ 1.9
USP7-201ENST00000344836 CENPBP07199 599 aaPredicted RBP26.76■■□□□ 1.88
USP7-201ENST00000344836 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
USP7-201ENST00000344836 CCER1Q8TC90 406 aaPredicted RBP26.68■■□□□ 1.86
USP7-201ENST00000344836 RANGAP1P46060 587 aaPredicted RBP26.39■■□□□ 1.82
USP7-201ENST00000344836 HRCP23327 699 aa26.36■■□□□ 1.81
USP7-201ENST00000344836 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
USP7-201ENST00000344836 UBTFP17480 764 aaKnown RBP26.28■■□□□ 1.8
USP7-201ENST00000344836 PPARGC1BQ86YN6 1023 aaKnown RBP26.16■■□□□ 1.78
USP7-201ENST00000344836 YTHDC1Q96MU7 727 aaKnown RBP26.16■■□□□ 1.78
USP7-201ENST00000344836 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
USP7-201ENST00000344836 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
USP7-201ENST00000344836 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
USP7-201ENST00000344836 MYT1Q01538 1121 aa26.02■■□□□ 1.76
USP7-201ENST00000344836 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
USP7-201ENST00000344836 NEFLP07196 543 aa25.93■■□□□ 1.74
USP7-201ENST00000344836 HNRNPUL2Q1KMD3 747 aaKnown RBP25.52■■□□□ 1.68
USP7-201ENST00000344836 ITGAEP38570 1179 aa25.46■■□□□ 1.67
USP7-201ENST00000344836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.46■■□□□ 1.67
USP7-201ENST00000344836 DIEXFQ68CQ4 756 aaKnown RBP25.39■■□□□ 1.66
USP7-201ENST00000344836 POLR3GLQ9BT43 218 aa25.09■■□□□ 1.61
USP7-201ENST00000344836 GTF3C3Q9Y5Q9 886 aa25.03■■□□□ 1.6
USP7-201ENST00000344836 DAXXQ9UER7 740 aaPredicted RBP24.97■■□□□ 1.59
USP7-201ENST00000344836 CNGB1Q14028 1251 aaPredicted RBP24.94■■□□□ 1.58
USP7-201ENST00000344836 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
USP7-201ENST00000344836 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
USP7-201ENST00000344836 ACIN1Q9UKV3 1341 aaKnown RBP24.76■■□□□ 1.55
USP7-201ENST00000344836 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
USP7-201ENST00000344836 BCANQ96GW7 911 aa24.71■■□□□ 1.55
USP7-201ENST00000344836 RTL5Q5HYW3 569 aaPredicted RBP24.66■■□□□ 1.54
USP7-201ENST00000344836 MYT1LQ9UL68 1186 aa24.65■■□□□ 1.54
USP7-201ENST00000344836 ANP32CO43423 234 aa24.58■■□□□ 1.53
USP7-201ENST00000344836 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
USP7-201ENST00000344836 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.522e-6■■□□□ 12.3
USP7-201ENST00000344836 ABCC9O60706 1549 aa24.55■■□□□ 1.52
USP7-201ENST00000344836 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
USP7-201ENST00000344836 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
USP7-201ENST00000344836 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
USP7-201ENST00000344836 CDK11AQ9UQ88 783 aaPredicted RBP24.45■■□□□ 1.5
USP7-201ENST00000344836 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
USP7-201ENST00000344836 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
USP7-201ENST00000344836 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
USP7-201ENST00000344836 P3H3Q8IVL6 736 aa24.17■■□□□ 1.46
USP7-201ENST00000344836 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.45
USP7-201ENST00000344836 FKBP8Q14318 412 aa24.11■■□□□ 1.45
USP7-201ENST00000344836 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
USP7-201ENST00000344836 DDX10Q13206 875 aaKnown RBP24.01■■□□□ 1.43
USP7-201ENST00000344836 ANP32AP39687 249 aaKnown RBP24.01■■□□□ 1.43
USP7-201ENST00000344836 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
USP7-201ENST00000344836 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
USP7-201ENST00000344836 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
USP7-201ENST00000344836 MIER1Q8N108 512 aa23.94■■□□□ 1.42
USP7-201ENST00000344836 HNRNPUQ00839 825 aaKnown RBP eCLIP23.94■■□□□ 1.42
USP7-201ENST00000344836 FBLN2P98095 1184 aa23.86■■□□□ 1.41
USP7-201ENST00000344836 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
USP7-201ENST00000344836 NPM2Q86SE8 214 aaKnown RBP23.85■■□□□ 1.41
USP7-201ENST00000344836 FAM9BQ8IZU0 186 aa23.8■■□□□ 1.4
USP7-201ENST00000344836 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
USP7-201ENST00000344836 ZBTB47Q9UFB7 747 aaPredicted RBP23.79■■□□□ 1.4
USP7-201ENST00000344836 CLIP1P30622 1438 aa23.69■■□□□ 1.38
USP7-201ENST00000344836 BCL11AQ9H165 835 aa23.64■■□□□ 1.38
USP7-201ENST00000344836 CCDC136Q96JN2 1154 aa23.63■■□□□ 1.37
USP7-201ENST00000344836 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
USP7-201ENST00000344836 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
USP7-201ENST00000344836 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
USP7-201ENST00000344836 HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
USP7-201ENST00000344836 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
USP7-201ENST00000344836 NEFMP07197 916 aa23.6■■□□□ 1.37
USP7-201ENST00000344836 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
USP7-201ENST00000344836 SALL2Q9Y467 1007 aaPredicted RBP23.58■■□□□ 1.37
USP7-201ENST00000344836 TMC1Q8TDI8 760 aa23.58■■□□□ 1.36
USP7-201ENST00000344836 IRX6P78412 446 aaPredicted RBP23.55■■□□□ 1.36
USP7-201ENST00000344836 EEA1Q15075 1411 aa23.52■■□□□ 1.36
USP7-201ENST00000344836 NBR1Q14596 966 aa23.52■■□□□ 1.36
USP7-201ENST00000344836 EIF5BO60841 1220 aaKnown RBP23.49■■□□□ 1.35
USP7-201ENST00000344836 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
USP7-201ENST00000344836 MTUS2Q5JR59 1369 aa23.47■■□□□ 1.35
USP7-201ENST00000344836 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
USP7-201ENST00000344836 UPF2Q9HAU5 1272 aaKnown RBP23.43■■□□□ 1.34
USP7-201ENST00000344836 SLC24A1O60721 1099 aa23.42■■□□□ 1.34
USP7-201ENST00000344836 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
USP7-201ENST00000344836 HSP90AA1P07900 732 aaKnown RBP23.36■■□□□ 1.33
USP7-201ENST00000344836 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
USP7-201ENST00000344836 KDM2AQ9Y2K7 1162 aa23.34■■□□□ 1.33
USP7-201ENST00000344836 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
USP7-201ENST00000344836 ANP32BQ92688 251 aaKnown RBP23.32■■□□□ 1.32
USP7-201ENST00000344836 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
USP7-201ENST00000344836 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
USP7-201ENST00000344836 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
USP7-201ENST00000344836 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms