RNA–Protein interactions for RNA: ENST00000437103.1

TOP3B-207, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-207ENST00000437103 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
TOP3B-207ENST00000437103 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
TOP3B-207ENST00000437103 ABCC9O60706 1549 aa26.31■■□□□ 1.8
TOP3B-207ENST00000437103 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
TOP3B-207ENST00000437103 DCAF8L2P0C7V8 631 aa25.25■■□□□ 1.63
TOP3B-207ENST00000437103 NACADO15069 1562 aa25.25■■□□□ 1.63
TOP3B-207ENST00000437103 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
TOP3B-207ENST00000437103 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
TOP3B-207ENST00000437103 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
TOP3B-207ENST00000437103 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
TOP3B-207ENST00000437103 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
TOP3B-207ENST00000437103 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
TOP3B-207ENST00000437103 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
TOP3B-207ENST00000437103 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
TOP3B-207ENST00000437103 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
TOP3B-207ENST00000437103 EIF4G1Q04637 1599 aaKnown RBP23.85■■□□□ 1.41
TOP3B-207ENST00000437103 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
TOP3B-207ENST00000437103 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
TOP3B-207ENST00000437103 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
TOP3B-207ENST00000437103 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
TOP3B-207ENST00000437103 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
TOP3B-207ENST00000437103 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
TOP3B-207ENST00000437103 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
TOP3B-207ENST00000437103 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
TOP3B-207ENST00000437103 PEG3Q9GZU2 1588 aa23.11■■□□□ 1.29
TOP3B-207ENST00000437103 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
TOP3B-207ENST00000437103 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
TOP3B-207ENST00000437103 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
TOP3B-207ENST00000437103 WIZO95785 1651 aa22.78■■□□□ 1.24
TOP3B-207ENST00000437103 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
TOP3B-207ENST00000437103 NESP48681 1621 aa22.69■■□□□ 1.22
TOP3B-207ENST00000437103 LAMC3Q9Y6N6 1575 aa22.68■■□□□ 1.22
TOP3B-207ENST00000437103 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
TOP3B-207ENST00000437103 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
TOP3B-207ENST00000437103 CUX2O14529 1486 aa22.6■■□□□ 1.21
TOP3B-207ENST00000437103 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
TOP3B-207ENST00000437103 CFTRP13569 1480 aa22.46■■□□□ 1.19
TOP3B-207ENST00000437103 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
TOP3B-207ENST00000437103 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
TOP3B-207ENST00000437103 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
TOP3B-207ENST00000437103 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
TOP3B-207ENST00000437103 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
TOP3B-207ENST00000437103 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
TOP3B-207ENST00000437103 WDR62O43379 1518 aa22.21■■□□□ 1.15
TOP3B-207ENST00000437103 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
TOP3B-207ENST00000437103 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
TOP3B-207ENST00000437103 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
TOP3B-207ENST00000437103 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
TOP3B-207ENST00000437103 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
TOP3B-207ENST00000437103 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
TOP3B-207ENST00000437103 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
TOP3B-207ENST00000437103 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
TOP3B-207ENST00000437103 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
TOP3B-207ENST00000437103 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
TOP3B-207ENST00000437103 SOGA1O94964 1423 aa21.72■■□□□ 1.07
TOP3B-207ENST00000437103 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
TOP3B-207ENST00000437103 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
TOP3B-207ENST00000437103 CUX1P39880 1505 aa21.66■■□□□ 1.06
TOP3B-207ENST00000437103 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.058e-7■■■■□ 23.5
TOP3B-207ENST00000437103 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.05
TOP3B-207ENST00000437103 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
TOP3B-207ENST00000437103 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
TOP3B-207ENST00000437103 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
TOP3B-207ENST00000437103 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
TOP3B-207ENST00000437103 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
TOP3B-207ENST00000437103 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
TOP3B-207ENST00000437103 FBLN2P98095 1184 aa21.47■■□□□ 1.03
TOP3B-207ENST00000437103 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
TOP3B-207ENST00000437103 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
TOP3B-207ENST00000437103 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
TOP3B-207ENST00000437103 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
TOP3B-207ENST00000437103 MAGI1Q96QZ7 1491 aaPredicted RBP21.42■■□□□ 1.02
TOP3B-207ENST00000437103 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
TOP3B-207ENST00000437103 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
TOP3B-207ENST00000437103 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
TOP3B-207ENST00000437103 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
TOP3B-207ENST00000437103 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
TOP3B-207ENST00000437103 TRIM41Q8WV44 630 aa21.29■■□□□ 1
TOP3B-207ENST00000437103 CHD1O14646 1710 aa21.29■■□□□ 1
TOP3B-207ENST00000437103 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
TOP3B-207ENST00000437103 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
TOP3B-207ENST00000437103 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
TOP3B-207ENST00000437103 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
TOP3B-207ENST00000437103 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
TOP3B-207ENST00000437103 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
TOP3B-207ENST00000437103 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
TOP3B-207ENST00000437103 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
TOP3B-207ENST00000437103 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
TOP3B-207ENST00000437103 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
TOP3B-207ENST00000437103 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
TOP3B-207ENST00000437103 IGF1RP08069 1367 aa21.1■□□□□ 0.97
TOP3B-207ENST00000437103 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
TOP3B-207ENST00000437103 NUP160Q12769 1436 aa21.08■□□□□ 0.97
TOP3B-207ENST00000437103 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
TOP3B-207ENST00000437103 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
TOP3B-207ENST00000437103 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
TOP3B-207ENST00000437103 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
TOP3B-207ENST00000437103 CUL7Q14999 1698 aa20.93■□□□□ 0.94
TOP3B-207ENST00000437103 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
TOP3B-207ENST00000437103 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms