RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
TOP3B-204ENST00000430142 ABCC9O60706 1549 aa34.13■■■■□ 3.05
TOP3B-204ENST00000430142 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
TOP3B-204ENST00000430142 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
TOP3B-204ENST00000430142 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
TOP3B-204ENST00000430142 NACADO15069 1562 aa32.13■■■□□ 2.73
TOP3B-204ENST00000430142 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
TOP3B-204ENST00000430142 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
TOP3B-204ENST00000430142 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
TOP3B-204ENST00000430142 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
TOP3B-204ENST00000430142 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
TOP3B-204ENST00000430142 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
TOP3B-204ENST00000430142 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
TOP3B-204ENST00000430142 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
TOP3B-204ENST00000430142 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
TOP3B-204ENST00000430142 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
TOP3B-204ENST00000430142 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
TOP3B-204ENST00000430142 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
TOP3B-204ENST00000430142 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
TOP3B-204ENST00000430142 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
TOP3B-204ENST00000430142 ATAD2BQ9ULI0 1458 aa29.59■■■□□ 2.33
TOP3B-204ENST00000430142 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
TOP3B-204ENST00000430142 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
TOP3B-204ENST00000430142 ERCC6Q03468 1493 aa29.45■■■□□ 2.31
TOP3B-204ENST00000430142 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
TOP3B-204ENST00000430142 CUX2O14529 1486 aa29.41■■■□□ 2.3
TOP3B-204ENST00000430142 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
TOP3B-204ENST00000430142 NESP48681 1621 aa29.29■■■□□ 2.28
TOP3B-204ENST00000430142 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
TOP3B-204ENST00000430142 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
TOP3B-204ENST00000430142 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
TOP3B-204ENST00000430142 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
TOP3B-204ENST00000430142 THOC2Q8NI27 1593 aaKnown RBP28.95■■■□□ 2.22
TOP3B-204ENST00000430142 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
TOP3B-204ENST00000430142 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
TOP3B-204ENST00000430142 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
TOP3B-204ENST00000430142 WIZO95785 1651 aa28.79■■■□□ 2.2
TOP3B-204ENST00000430142 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
TOP3B-204ENST00000430142 WDR62O43379 1518 aa28.53■■■□□ 2.16
TOP3B-204ENST00000430142 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
TOP3B-204ENST00000430142 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
TOP3B-204ENST00000430142 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
TOP3B-204ENST00000430142 CFTRP13569 1480 aa28.44■■■□□ 2.14
TOP3B-204ENST00000430142 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
TOP3B-204ENST00000430142 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
TOP3B-204ENST00000430142 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
TOP3B-204ENST00000430142 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
TOP3B-204ENST00000430142 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
TOP3B-204ENST00000430142 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
TOP3B-204ENST00000430142 IFT140Q96RY7 1462 aa27.93■■■□□ 2.06
TOP3B-204ENST00000430142 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
TOP3B-204ENST00000430142 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
TOP3B-204ENST00000430142 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
TOP3B-204ENST00000430142 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
TOP3B-204ENST00000430142 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
TOP3B-204ENST00000430142 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
TOP3B-204ENST00000430142 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
TOP3B-204ENST00000430142 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
TOP3B-204ENST00000430142 AQRO60306 1485 aaKnown RBP eCLIP27.68■■■□□ 2.024e-7■■■■□ 22.6
TOP3B-204ENST00000430142 TARBP1Q13395 1621 aaKnown RBP27.65■■■□□ 2.02
TOP3B-204ENST00000430142 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
TOP3B-204ENST00000430142 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
TOP3B-204ENST00000430142 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
TOP3B-204ENST00000430142 FBLN2P98095 1184 aa27.55■■■□□ 2
TOP3B-204ENST00000430142 SOGA1O94964 1423 aa27.52■■■□□ 2
TOP3B-204ENST00000430142 CHD1O14646 1710 aa27.51■■□□□ 1.99
TOP3B-204ENST00000430142 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
TOP3B-204ENST00000430142 CYB5RLQ6IPT4 315 aa27.5■■□□□ 1.99
TOP3B-204ENST00000430142 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
TOP3B-204ENST00000430142 CUX1P39880 1505 aa27.39■■□□□ 1.98
TOP3B-204ENST00000430142 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
TOP3B-204ENST00000430142 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
TOP3B-204ENST00000430142 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
TOP3B-204ENST00000430142 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
TOP3B-204ENST00000430142 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
TOP3B-204ENST00000430142 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
TOP3B-204ENST00000430142 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
TOP3B-204ENST00000430142 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
TOP3B-204ENST00000430142 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
TOP3B-204ENST00000430142 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
TOP3B-204ENST00000430142 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
TOP3B-204ENST00000430142 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
TOP3B-204ENST00000430142 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
TOP3B-204ENST00000430142 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
TOP3B-204ENST00000430142 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
TOP3B-204ENST00000430142 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
TOP3B-204ENST00000430142 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
TOP3B-204ENST00000430142 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
TOP3B-204ENST00000430142 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
TOP3B-204ENST00000430142 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
TOP3B-204ENST00000430142 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
TOP3B-204ENST00000430142 NUP160Q12769 1436 aa26.82■■□□□ 1.88
TOP3B-204ENST00000430142 CEP170Q5SW79 1584 aa26.81■■□□□ 1.88
TOP3B-204ENST00000430142 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
TOP3B-204ENST00000430142 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
TOP3B-204ENST00000430142 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
TOP3B-204ENST00000430142 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
TOP3B-204ENST00000430142 PRG4Q92954 1404 aaPredicted RBP26.61■■□□□ 1.85
TOP3B-204ENST00000430142 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
TOP3B-204ENST00000430142 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms