RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
HNRNPC-218ENST00000555215 ABCC9O60706 1549 aa22.92■■□□□ 1.26
HNRNPC-218ENST00000555215 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
HNRNPC-218ENST00000555215 DNAJC5BQ9UF47 199 aa21.67■■□□□ 1.06
HNRNPC-218ENST00000555215 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
HNRNPC-218ENST00000555215 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
HNRNPC-218ENST00000555215 NACADO15069 1562 aa21.52■■□□□ 1.04
HNRNPC-218ENST00000555215 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
HNRNPC-218ENST00000555215 UNC13AQ9UPW8 1703 aa21.22■□□□□ 0.99
HNRNPC-218ENST00000555215 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
HNRNPC-218ENST00000555215 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
HNRNPC-218ENST00000555215 ZCCHC6Q5VYS8 1495 aaKnown RBP21.06■□□□□ 0.96
HNRNPC-218ENST00000555215 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
HNRNPC-218ENST00000555215 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
HNRNPC-218ENST00000555215 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
HNRNPC-218ENST00000555215 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.9
HNRNPC-218ENST00000555215 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
HNRNPC-218ENST00000555215 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
HNRNPC-218ENST00000555215 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
HNRNPC-218ENST00000555215 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
HNRNPC-218ENST00000555215 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
HNRNPC-218ENST00000555215 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
HNRNPC-218ENST00000555215 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
HNRNPC-218ENST00000555215 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
HNRNPC-218ENST00000555215 NESP48681 1621 aa19.71■□□□□ 0.75
HNRNPC-218ENST00000555215 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
HNRNPC-218ENST00000555215 BAZ1AQ9NRL2 1556 aaPredicted RBP19.67■□□□□ 0.74
HNRNPC-218ENST00000555215 CUX2O14529 1486 aa19.65■□□□□ 0.74
HNRNPC-218ENST00000555215 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
HNRNPC-218ENST00000555215 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
HNRNPC-218ENST00000555215 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
HNRNPC-218ENST00000555215 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
HNRNPC-218ENST00000555215 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
HNRNPC-218ENST00000555215 WIZO95785 1651 aa19.38■□□□□ 0.69
HNRNPC-218ENST00000555215 KIF21AQ7Z4S6 1674 aa19.35■□□□□ 0.69
HNRNPC-218ENST00000555215 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
HNRNPC-218ENST00000555215 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.68
HNRNPC-218ENST00000555215 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
HNRNPC-218ENST00000555215 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
HNRNPC-218ENST00000555215 WDR62O43379 1518 aa19.13■□□□□ 0.65
HNRNPC-218ENST00000555215 CFTRP13569 1480 aa19.1■□□□□ 0.65
HNRNPC-218ENST00000555215 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
HNRNPC-218ENST00000555215 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
HNRNPC-218ENST00000555215 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
HNRNPC-218ENST00000555215 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
HNRNPC-218ENST00000555215 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
HNRNPC-218ENST00000555215 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
HNRNPC-218ENST00000555215 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
HNRNPC-218ENST00000555215 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
HNRNPC-218ENST00000555215 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
HNRNPC-218ENST00000555215 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
HNRNPC-218ENST00000555215 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
HNRNPC-218ENST00000555215 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
HNRNPC-218ENST00000555215 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.573e-7■■■■■ 28.5
HNRNPC-218ENST00000555215 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
HNRNPC-218ENST00000555215 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
HNRNPC-218ENST00000555215 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
HNRNPC-218ENST00000555215 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
HNRNPC-218ENST00000555215 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
HNRNPC-218ENST00000555215 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
HNRNPC-218ENST00000555215 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
HNRNPC-218ENST00000555215 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
HNRNPC-218ENST00000555215 ARHGEF11O15085 1522 aa18.5■□□□□ 0.55
HNRNPC-218ENST00000555215 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
HNRNPC-218ENST00000555215 SOGA1O94964 1423 aa18.48■□□□□ 0.55
HNRNPC-218ENST00000555215 FBLN2P98095 1184 aa18.47■□□□□ 0.55
HNRNPC-218ENST00000555215 CUX1P39880 1505 aa18.44■□□□□ 0.54
HNRNPC-218ENST00000555215 CHD1O14646 1710 aa18.44■□□□□ 0.54
HNRNPC-218ENST00000555215 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
HNRNPC-218ENST00000555215 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
HNRNPC-218ENST00000555215 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
HNRNPC-218ENST00000555215 SNAPC4Q5SXM2 1469 aa18.37■□□□□ 0.53
HNRNPC-218ENST00000555215 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
HNRNPC-218ENST00000555215 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
HNRNPC-218ENST00000555215 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
HNRNPC-218ENST00000555215 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
HNRNPC-218ENST00000555215 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
HNRNPC-218ENST00000555215 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
HNRNPC-218ENST00000555215 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
HNRNPC-218ENST00000555215 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
HNRNPC-218ENST00000555215 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
HNRNPC-218ENST00000555215 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
HNRNPC-218ENST00000555215 SYNJ1O43426 1573 aa18.18■□□□□ 0.5
HNRNPC-218ENST00000555215 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
HNRNPC-218ENST00000555215 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
HNRNPC-218ENST00000555215 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
HNRNPC-218ENST00000555215 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
HNRNPC-218ENST00000555215 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
HNRNPC-218ENST00000555215 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
HNRNPC-218ENST00000555215 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
HNRNPC-218ENST00000555215 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
HNRNPC-218ENST00000555215 NUP160Q12769 1436 aa18.02■□□□□ 0.48
HNRNPC-218ENST00000555215 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
HNRNPC-218ENST00000555215 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
HNRNPC-218ENST00000555215 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
HNRNPC-218ENST00000555215 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
HNRNPC-218ENST00000555215 JPH4Q96JJ6 628 aa17.87■□□□□ 0.45
HNRNPC-218ENST00000555215 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
HNRNPC-218ENST00000555215 IGF1RP08069 1367 aa17.81■□□□□ 0.44
HNRNPC-218ENST00000555215 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms