RNA–Protein interactions for RNA: ENST00000523114.5

ARFGAP1-217, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-217ENST00000523114 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
ARFGAP1-217ENST00000523114 CCDC180Q9P1Z9 1646 aa37.24■■■■□ 3.55
ARFGAP1-217ENST00000523114 ZCCHC6Q5VYS8 1495 aaKnown RBP35.59■■■■□ 3.29
ARFGAP1-217ENST00000523114 ABCC9O60706 1549 aa35.43■■■■□ 3.26
ARFGAP1-217ENST00000523114 DCAF1Q9Y4B6 1507 aa35.21■■■■□ 3.23
ARFGAP1-217ENST00000523114 DCAF8L2P0C7V8 631 aa35.02■■■■□ 3.2
ARFGAP1-217ENST00000523114 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
ARFGAP1-217ENST00000523114 NACADO15069 1562 aa34.8■■■■□ 3.16
ARFGAP1-217ENST00000523114 RB1CC1Q8TDY2 1594 aa34.55■■■■□ 3.12
ARFGAP1-217ENST00000523114 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
ARFGAP1-217ENST00000523114 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
ARFGAP1-217ENST00000523114 UNC13AQ9UPW8 1703 aa33.7■■■□□ 2.99
ARFGAP1-217ENST00000523114 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
ARFGAP1-217ENST00000523114 PABPN1Q86U42 306 aaKnown RBP eCLIP33.31■■■□□ 2.92
ARFGAP1-217ENST00000523114 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.87
ARFGAP1-217ENST00000523114 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
ARFGAP1-217ENST00000523114 RSF1Q96T23 1441 aaPredicted RBP32.77■■■□□ 2.84
ARFGAP1-217ENST00000523114 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
ARFGAP1-217ENST00000523114 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
ARFGAP1-217ENST00000523114 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
ARFGAP1-217ENST00000523114 EIF4G1Q04637 1599 aaKnown RBP32.5■■■□□ 2.79
ARFGAP1-217ENST00000523114 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
ARFGAP1-217ENST00000523114 WIZO95785 1651 aa32.39■■■□□ 2.78
ARFGAP1-217ENST00000523114 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
ARFGAP1-217ENST00000523114 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
ARFGAP1-217ENST00000523114 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
ARFGAP1-217ENST00000523114 NCAPD3P42695 1498 aa32.13■■■□□ 2.73
ARFGAP1-217ENST00000523114 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
ARFGAP1-217ENST00000523114 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
ARFGAP1-217ENST00000523114 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
ARFGAP1-217ENST00000523114 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
ARFGAP1-217ENST00000523114 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
ARFGAP1-217ENST00000523114 CFTRP13569 1480 aa31.27■■■□□ 2.6
ARFGAP1-217ENST00000523114 CADPSQ9ULU8 1353 aa31.24■■■□□ 2.59
ARFGAP1-217ENST00000523114 CHIC1Q5VXU3 224 aa31.19■■■□□ 2.58
ARFGAP1-217ENST00000523114 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
ARFGAP1-217ENST00000523114 PRDM2Q13029 1718 aa31.01■■■□□ 2.56
ARFGAP1-217ENST00000523114 NESP48681 1621 aa30.97■■■□□ 2.55
ARFGAP1-217ENST00000523114 ABCC8Q09428 1581 aa30.89■■■□□ 2.54
ARFGAP1-217ENST00000523114 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
ARFGAP1-217ENST00000523114 FANCD2Q9BXW9 1451 aa30.85■■■□□ 2.53
ARFGAP1-217ENST00000523114 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
ARFGAP1-217ENST00000523114 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
ARFGAP1-217ENST00000523114 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
ARFGAP1-217ENST00000523114 SYNJ1O43426 1573 aa30.68■■■□□ 2.5
ARFGAP1-217ENST00000523114 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
ARFGAP1-217ENST00000523114 CUX1P39880 1505 aa30.63■■■□□ 2.49
ARFGAP1-217ENST00000523114 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
ARFGAP1-217ENST00000523114 KIF21AQ7Z4S6 1674 aa30.58■■■□□ 2.49
ARFGAP1-217ENST00000523114 DNMBPQ6XZF7 1577 aa30.52■■■□□ 2.48
ARFGAP1-217ENST00000523114 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
ARFGAP1-217ENST00000523114 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
ARFGAP1-217ENST00000523114 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
ARFGAP1-217ENST00000523114 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
ARFGAP1-217ENST00000523114 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
ARFGAP1-217ENST00000523114 WDR62O43379 1518 aa30.32■■■□□ 2.44
ARFGAP1-217ENST00000523114 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
ARFGAP1-217ENST00000523114 EEA1Q15075 1411 aa30.29■■■□□ 2.44
ARFGAP1-217ENST00000523114 SOGA1O94964 1423 aa30.28■■■□□ 2.44
ARFGAP1-217ENST00000523114 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.43
ARFGAP1-217ENST00000523114 FAM9AQ8IZU1 332 aaPredicted RBP30.17■■■□□ 2.42
ARFGAP1-217ENST00000523114 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
ARFGAP1-217ENST00000523114 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
ARFGAP1-217ENST00000523114 RAD54L2Q9Y4B4 1467 aa30.14■■■□□ 2.42
ARFGAP1-217ENST00000523114 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
ARFGAP1-217ENST00000523114 CUX2O14529 1486 aa30.09■■■□□ 2.41
ARFGAP1-217ENST00000523114 CSRNP3Q8WYN3 585 aa30.09■■■□□ 2.41
ARFGAP1-217ENST00000523114 TARBP1Q13395 1621 aaKnown RBP30.05■■■□□ 2.4
ARFGAP1-217ENST00000523114 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
ARFGAP1-217ENST00000523114 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
ARFGAP1-217ENST00000523114 IGF1RP08069 1367 aa29.9■■■□□ 2.38
ARFGAP1-217ENST00000523114 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
ARFGAP1-217ENST00000523114 LOC105371045A0A1W2PR82 267 aa29.89■■■□□ 2.38
ARFGAP1-217ENST00000523114 TDRD9Q8NDG6 1382 aaKnown RBP29.89■■■□□ 2.37
ARFGAP1-217ENST00000523114 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
ARFGAP1-217ENST00000523114 KIF21BO75037 1637 aa29.84■■■□□ 2.37
ARFGAP1-217ENST00000523114 PRXQ9BXM0 1461 aa29.83■■■□□ 2.37
ARFGAP1-217ENST00000523114 ERICH3Q5RHP9 1530 aa29.8■■■□□ 2.36
ARFGAP1-217ENST00000523114 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
ARFGAP1-217ENST00000523114 AQRO60306 1485 aaKnown RBP eCLIP29.77■■■□□ 2.363e-6■■■■□ 23.7
ARFGAP1-217ENST00000523114 GOLGA3Q08378 1498 aa29.77■■■□□ 2.36
ARFGAP1-217ENST00000523114 CARMIL1Q5VZK9 1371 aa29.74■■■□□ 2.35
ARFGAP1-217ENST00000523114 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
ARFGAP1-217ENST00000523114 CUL7Q14999 1698 aa29.69■■■□□ 2.34
ARFGAP1-217ENST00000523114 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
ARFGAP1-217ENST00000523114 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
ARFGAP1-217ENST00000523114 PBRM1Q86U86 1689 aa29.66■■■□□ 2.34
ARFGAP1-217ENST00000523114 EHMT2Q96KQ7 1210 aa29.65■■■□□ 2.34
ARFGAP1-217ENST00000523114 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.33
ARFGAP1-217ENST00000523114 UBTFP17480 764 aaKnown RBP29.59■■■□□ 2.33
ARFGAP1-217ENST00000523114 FHAD1B1AJZ9 1412 aa29.57■■■□□ 2.32
ARFGAP1-217ENST00000523114 ADAMTS12P58397 1594 aa29.53■■■□□ 2.32
ARFGAP1-217ENST00000523114 MAGI1Q96QZ7 1491 aaPredicted RBP29.53■■■□□ 2.32
ARFGAP1-217ENST00000523114 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
ARFGAP1-217ENST00000523114 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
ARFGAP1-217ENST00000523114 CEP162Q5TB80 1403 aa29.37■■■□□ 2.29
ARFGAP1-217ENST00000523114 GRIN2AQ12879 1464 aa29.33■■■□□ 2.29
ARFGAP1-217ENST00000523114 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
ARFGAP1-217ENST00000523114 CLIP1P30622 1438 aa29.26■■■□□ 2.27
ARFGAP1-217ENST00000523114 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms