RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
HNRNPC-233ENST00000557768 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
HNRNPC-233ENST00000557768 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
HNRNPC-233ENST00000557768 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
HNRNPC-233ENST00000557768 FOXD1Q16676 465 aa18.74■□□□□ 0.59
HNRNPC-233ENST00000557768 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
HNRNPC-233ENST00000557768 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
HNRNPC-233ENST00000557768 ADRA2BP18089 450 aa17.9■□□□□ 0.46
HNRNPC-233ENST00000557768 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
HNRNPC-233ENST00000557768 MSH5O43196 834 aa17.33■□□□□ 0.36
HNRNPC-233ENST00000557768 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
HNRNPC-233ENST00000557768 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
HNRNPC-233ENST00000557768 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
HNRNPC-233ENST00000557768 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
HNRNPC-233ENST00000557768 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
HNRNPC-233ENST00000557768 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
HNRNPC-233ENST00000557768 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
HNRNPC-233ENST00000557768 KCNA4P22459 653 aa15.81■□□□□ 0.12
HNRNPC-233ENST00000557768 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
HNRNPC-233ENST00000557768 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
HNRNPC-233ENST00000557768 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
HNRNPC-233ENST00000557768 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
HNRNPC-233ENST00000557768 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
HNRNPC-233ENST00000557768 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
HNRNPC-233ENST00000557768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.015e-21■□□□□ 9.7
HNRNPC-233ENST00000557768 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
HNRNPC-233ENST00000557768 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
HNRNPC-233ENST00000557768 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
HNRNPC-233ENST00000557768 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
HNRNPC-233ENST00000557768 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-233ENST00000557768 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
HNRNPC-233ENST00000557768 ZBTB22O15209 634 aa14.53□□□□□ -0.08
HNRNPC-233ENST00000557768 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
HNRNPC-233ENST00000557768 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
HNRNPC-233ENST00000557768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
HNRNPC-233ENST00000557768 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
HNRNPC-233ENST00000557768 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
HNRNPC-233ENST00000557768 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-233ENST00000557768 CAPN15O75808 1086 aa14.32□□□□□ -0.12
HNRNPC-233ENST00000557768 APLP2Q06481 763 aa14.3□□□□□ -0.12
HNRNPC-233ENST00000557768 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
HNRNPC-233ENST00000557768 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
HNRNPC-233ENST00000557768 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-233ENST00000557768 ATF5Q9Y2D1 282 aaPredicted RBP14.12□□□□□ -0.15
HNRNPC-233ENST00000557768 DSG3P32926 999 aa14.06□□□□□ -0.16
HNRNPC-233ENST00000557768 ABCB7O75027 752 aa14.04□□□□□ -0.16
HNRNPC-233ENST00000557768 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
HNRNPC-233ENST00000557768 POLA2Q14181 598 aa13.92□□□□□ -0.18
HNRNPC-233ENST00000557768 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-233ENST00000557768 FBLN2P98095 1184 aa13.54□□□□□ -0.24
HNRNPC-233ENST00000557768 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
HNRNPC-233ENST00000557768 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-233ENST00000557768 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
HNRNPC-233ENST00000557768 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-233ENST00000557768 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
HNRNPC-233ENST00000557768 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
HNRNPC-233ENST00000557768 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
HNRNPC-233ENST00000557768 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-233ENST00000557768 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
HNRNPC-233ENST00000557768 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
HNRNPC-233ENST00000557768 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
HNRNPC-233ENST00000557768 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-233ENST00000557768 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
HNRNPC-233ENST00000557768 FKBP8Q14318 412 aa12.98□□□□□ -0.33
HNRNPC-233ENST00000557768 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
HNRNPC-233ENST00000557768 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
HNRNPC-233ENST00000557768 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
HNRNPC-233ENST00000557768 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-233ENST00000557768 PROM2Q8N271 834 aa12.79□□□□□ -0.36
HNRNPC-233ENST00000557768 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
HNRNPC-233ENST00000557768 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
HNRNPC-233ENST00000557768 POTEHQ6S545 545 aa12.73□□□□□ -0.37
HNRNPC-233ENST00000557768 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
HNRNPC-233ENST00000557768 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
HNRNPC-233ENST00000557768 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-233ENST00000557768 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
HNRNPC-233ENST00000557768 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
HNRNPC-233ENST00000557768 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
HNRNPC-233ENST00000557768 MIER1Q8N108 512 aa12.48□□□□□ -0.41
HNRNPC-233ENST00000557768 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
HNRNPC-233ENST00000557768 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-233ENST00000557768 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
HNRNPC-233ENST00000557768 HAX1O00165 279 aa12.41□□□□□ -0.42
HNRNPC-233ENST00000557768 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-233ENST00000557768 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-233ENST00000557768 ABCC9O60706 1549 aa12.33□□□□□ -0.44
HNRNPC-233ENST00000557768 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
HNRNPC-233ENST00000557768 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
HNRNPC-233ENST00000557768 EVX2Q03828 476 aa12.27□□□□□ -0.45
HNRNPC-233ENST00000557768 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-233ENST00000557768 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
HNRNPC-233ENST00000557768 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
HNRNPC-233ENST00000557768 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
HNRNPC-233ENST00000557768 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
HNRNPC-233ENST00000557768 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-233ENST00000557768 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
HNRNPC-233ENST00000557768 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-233ENST00000557768 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-233ENST00000557768 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
HNRNPC-233ENST00000557768 NUBP1P53384 320 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms