RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
HNRNPC-230ENST00000557201 ABCC9O60706 1549 aa24.38■■□□□ 1.49
HNRNPC-230ENST00000557201 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
HNRNPC-230ENST00000557201 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
HNRNPC-230ENST00000557201 NACADO15069 1562 aa23.04■■□□□ 1.28
HNRNPC-230ENST00000557201 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
HNRNPC-230ENST00000557201 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
HNRNPC-230ENST00000557201 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
HNRNPC-230ENST00000557201 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
HNRNPC-230ENST00000557201 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
HNRNPC-230ENST00000557201 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.21
HNRNPC-230ENST00000557201 ZCCHC6Q5VYS8 1495 aaKnown RBP22.48■■□□□ 1.19
HNRNPC-230ENST00000557201 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
HNRNPC-230ENST00000557201 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
HNRNPC-230ENST00000557201 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
HNRNPC-230ENST00000557201 SCRIBQ14160 1630 aa22.14■■□□□ 1.13
HNRNPC-230ENST00000557201 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
HNRNPC-230ENST00000557201 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
HNRNPC-230ENST00000557201 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
HNRNPC-230ENST00000557201 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
HNRNPC-230ENST00000557201 NCAPD3P42695 1498 aa21.31■■□□□ 1
HNRNPC-230ENST00000557201 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
HNRNPC-230ENST00000557201 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
HNRNPC-230ENST00000557201 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
HNRNPC-230ENST00000557201 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
HNRNPC-230ENST00000557201 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
HNRNPC-230ENST00000557201 CUX2O14529 1486 aa21.07■□□□□ 0.96
HNRNPC-230ENST00000557201 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
HNRNPC-230ENST00000557201 ERCC6Q03468 1493 aa21.02■□□□□ 0.96
HNRNPC-230ENST00000557201 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
HNRNPC-230ENST00000557201 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
HNRNPC-230ENST00000557201 NESP48681 1621 aa20.95■□□□□ 0.94
HNRNPC-230ENST00000557201 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
HNRNPC-230ENST00000557201 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
HNRNPC-230ENST00000557201 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
HNRNPC-230ENST00000557201 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
HNRNPC-230ENST00000557201 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
HNRNPC-230ENST00000557201 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
HNRNPC-230ENST00000557201 WIZO95785 1651 aa20.61■□□□□ 0.89
HNRNPC-230ENST00000557201 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
HNRNPC-230ENST00000557201 WDR62O43379 1518 aa20.47■□□□□ 0.87
HNRNPC-230ENST00000557201 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
HNRNPC-230ENST00000557201 CFTRP13569 1480 aa20.4■□□□□ 0.86
HNRNPC-230ENST00000557201 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
HNRNPC-230ENST00000557201 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
HNRNPC-230ENST00000557201 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
HNRNPC-230ENST00000557201 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
HNRNPC-230ENST00000557201 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.82
HNRNPC-230ENST00000557201 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
HNRNPC-230ENST00000557201 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
HNRNPC-230ENST00000557201 OSCARQ8IYS5 282 aa20.08■□□□□ 0.8
HNRNPC-230ENST00000557201 IFT140Q96RY7 1462 aa20■□□□□ 0.79
HNRNPC-230ENST00000557201 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
HNRNPC-230ENST00000557201 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
HNRNPC-230ENST00000557201 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
HNRNPC-230ENST00000557201 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
HNRNPC-230ENST00000557201 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
HNRNPC-230ENST00000557201 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.77
HNRNPC-230ENST00000557201 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
HNRNPC-230ENST00000557201 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
HNRNPC-230ENST00000557201 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
HNRNPC-230ENST00000557201 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
HNRNPC-230ENST00000557201 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.762e-7■■■■□ 24.5
HNRNPC-230ENST00000557201 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
HNRNPC-230ENST00000557201 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
HNRNPC-230ENST00000557201 CHD1O14646 1710 aa19.69■□□□□ 0.74
HNRNPC-230ENST00000557201 SOGA1O94964 1423 aa19.67■□□□□ 0.74
HNRNPC-230ENST00000557201 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
HNRNPC-230ENST00000557201 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
HNRNPC-230ENST00000557201 CUX1P39880 1505 aa19.63■□□□□ 0.73
HNRNPC-230ENST00000557201 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
HNRNPC-230ENST00000557201 FBLN2P98095 1184 aa19.59■□□□□ 0.73
HNRNPC-230ENST00000557201 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
HNRNPC-230ENST00000557201 ARAP1Q96P48 1450 aa19.59■□□□□ 0.73
HNRNPC-230ENST00000557201 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
HNRNPC-230ENST00000557201 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
HNRNPC-230ENST00000557201 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
HNRNPC-230ENST00000557201 GRIN2BQ13224 1484 aa19.52■□□□□ 0.71
HNRNPC-230ENST00000557201 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
HNRNPC-230ENST00000557201 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
HNRNPC-230ENST00000557201 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
HNRNPC-230ENST00000557201 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
HNRNPC-230ENST00000557201 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
HNRNPC-230ENST00000557201 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
HNRNPC-230ENST00000557201 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
HNRNPC-230ENST00000557201 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
HNRNPC-230ENST00000557201 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
HNRNPC-230ENST00000557201 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
HNRNPC-230ENST00000557201 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
HNRNPC-230ENST00000557201 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
HNRNPC-230ENST00000557201 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
HNRNPC-230ENST00000557201 GRIN2AQ12879 1464 aa19.27■□□□□ 0.68
HNRNPC-230ENST00000557201 NUP160Q12769 1436 aa19.25■□□□□ 0.67
HNRNPC-230ENST00000557201 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
HNRNPC-230ENST00000557201 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
HNRNPC-230ENST00000557201 ERCC6L2Q5T890 1561 aa19.21■□□□□ 0.67
HNRNPC-230ENST00000557201 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
HNRNPC-230ENST00000557201 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
HNRNPC-230ENST00000557201 SHROOM2Q13796 1616 aa19.16■□□□□ 0.66
HNRNPC-230ENST00000557201 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms