RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
HNRNPC-216ENST00000555137 ABCC9O60706 1549 aa22.19■■□□□ 1.14
HNRNPC-216ENST00000555137 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
HNRNPC-216ENST00000555137 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
HNRNPC-216ENST00000555137 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
HNRNPC-216ENST00000555137 NACADO15069 1562 aa20.85■□□□□ 0.93
HNRNPC-216ENST00000555137 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
HNRNPC-216ENST00000555137 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
HNRNPC-216ENST00000555137 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
HNRNPC-216ENST00000555137 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
HNRNPC-216ENST00000555137 BICRAQ9NZM4 1560 aa20.5■□□□□ 0.87
HNRNPC-216ENST00000555137 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
HNRNPC-216ENST00000555137 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
HNRNPC-216ENST00000555137 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
HNRNPC-216ENST00000555137 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
HNRNPC-216ENST00000555137 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
HNRNPC-216ENST00000555137 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
HNRNPC-216ENST00000555137 EIF4G1Q04637 1599 aaKnown RBP19.96■□□□□ 0.79
HNRNPC-216ENST00000555137 NCAPD3P42695 1498 aa19.27■□□□□ 0.67
HNRNPC-216ENST00000555137 DNAJC5Q9H3Z4 198 aa19.26■□□□□ 0.67
HNRNPC-216ENST00000555137 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
HNRNPC-216ENST00000555137 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
HNRNPC-216ENST00000555137 CUX2O14529 1486 aa19.13■□□□□ 0.65
HNRNPC-216ENST00000555137 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
HNRNPC-216ENST00000555137 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
HNRNPC-216ENST00000555137 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
HNRNPC-216ENST00000555137 NESP48681 1621 aa19.06■□□□□ 0.64
HNRNPC-216ENST00000555137 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
HNRNPC-216ENST00000555137 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
HNRNPC-216ENST00000555137 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
HNRNPC-216ENST00000555137 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
HNRNPC-216ENST00000555137 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
HNRNPC-216ENST00000555137 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
HNRNPC-216ENST00000555137 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
HNRNPC-216ENST00000555137 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
HNRNPC-216ENST00000555137 WIZO95785 1651 aa18.69■□□□□ 0.58
HNRNPC-216ENST00000555137 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
HNRNPC-216ENST00000555137 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
HNRNPC-216ENST00000555137 WDR62O43379 1518 aa18.57■□□□□ 0.56
HNRNPC-216ENST00000555137 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
HNRNPC-216ENST00000555137 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
HNRNPC-216ENST00000555137 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
HNRNPC-216ENST00000555137 CFTRP13569 1480 aa18.45■□□□□ 0.54
HNRNPC-216ENST00000555137 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
HNRNPC-216ENST00000555137 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
HNRNPC-216ENST00000555137 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
HNRNPC-216ENST00000555137 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
HNRNPC-216ENST00000555137 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
HNRNPC-216ENST00000555137 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
HNRNPC-216ENST00000555137 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
HNRNPC-216ENST00000555137 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
HNRNPC-216ENST00000555137 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
HNRNPC-216ENST00000555137 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
HNRNPC-216ENST00000555137 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
HNRNPC-216ENST00000555137 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
HNRNPC-216ENST00000555137 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
HNRNPC-216ENST00000555137 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
HNRNPC-216ENST00000555137 ABCC8Q09428 1581 aa18■□□□□ 0.47
HNRNPC-216ENST00000555137 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
HNRNPC-216ENST00000555137 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
HNRNPC-216ENST00000555137 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.464e-7■■■■■ 28.5
HNRNPC-216ENST00000555137 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
HNRNPC-216ENST00000555137 CHD1O14646 1710 aa17.92■□□□□ 0.46
HNRNPC-216ENST00000555137 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
HNRNPC-216ENST00000555137 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
HNRNPC-216ENST00000555137 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
HNRNPC-216ENST00000555137 SOGA1O94964 1423 aa17.81■□□□□ 0.44
HNRNPC-216ENST00000555137 FBLN2P98095 1184 aa17.81■□□□□ 0.44
HNRNPC-216ENST00000555137 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
HNRNPC-216ENST00000555137 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
HNRNPC-216ENST00000555137 CUX1P39880 1505 aa17.79■□□□□ 0.44
HNRNPC-216ENST00000555137 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
HNRNPC-216ENST00000555137 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
HNRNPC-216ENST00000555137 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
HNRNPC-216ENST00000555137 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
HNRNPC-216ENST00000555137 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
HNRNPC-216ENST00000555137 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
HNRNPC-216ENST00000555137 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
HNRNPC-216ENST00000555137 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
HNRNPC-216ENST00000555137 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
HNRNPC-216ENST00000555137 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
HNRNPC-216ENST00000555137 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
HNRNPC-216ENST00000555137 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
HNRNPC-216ENST00000555137 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
HNRNPC-216ENST00000555137 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
HNRNPC-216ENST00000555137 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
HNRNPC-216ENST00000555137 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
HNRNPC-216ENST00000555137 ADAMTS12P58397 1594 aa17.47■□□□□ 0.39
HNRNPC-216ENST00000555137 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
HNRNPC-216ENST00000555137 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
HNRNPC-216ENST00000555137 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
HNRNPC-216ENST00000555137 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
HNRNPC-216ENST00000555137 NUP160Q12769 1436 aa17.42■□□□□ 0.38
HNRNPC-216ENST00000555137 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
HNRNPC-216ENST00000555137 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
HNRNPC-216ENST00000555137 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
HNRNPC-216ENST00000555137 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
HNRNPC-216ENST00000555137 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
HNRNPC-216ENST00000555137 KIF13AQ9H1H9 1805 aa17.2■□□□□ 0.34
HNRNPC-216ENST00000555137 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms