Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 SPN-205ENST00000563039 1853 ntTSL 515.26■□□□□ 0.036e-7■□□□□ 10.7
SUB1P53999 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.026e-7■□□□□ 10.7
SUB1P53999 TCF3-219ENST00000610756 1343 ntTSL 1 (best)14.51□□□□□ -0.096e-7■□□□□ 10.7
SUB1P53999 NME1-210ENST00000512768 1056 ntTSL 1 (best)14.06□□□□□ -0.166e-7■□□□□ 10.7
SUB1P53999 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.01□□□□□ -0.176e-7■□□□□ 10.7
SUB1P53999 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.196e-7■□□□□ 10.7
SUB1P53999 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.276e-7■□□□□ 10.7
SUB1P53999 TIAL1-211ENST00000489822 2222 ntTSL 213.16□□□□□ -0.36e-7■□□□□ 10.7
SUB1P53999 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.326e-7■□□□□ 10.7
SUB1P53999 TCF3-214ENST00000590605 541 ntTSL 212.42□□□□□ -0.426e-7■□□□□ 10.7
SUB1P53999 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.56e-7■□□□□ 10.7
SUB1P53999 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)11.85□□□□□ -0.516e-7■□□□□ 10.7
SUB1P53999 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.526e-7■□□□□ 10.7
SUB1P53999 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.586e-7■□□□□ 10.7
SUB1P53999 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.616e-7■□□□□ 10.7
SUB1P53999 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.19□□□□□ -0.626e-7■□□□□ 10.7
SUB1P53999 NME1-208ENST00000487481 987 ntTSL 210.64□□□□□ -0.716e-7■□□□□ 10.7
SUB1P53999 TCF3-209ENST00000586410 288 ntTSL 510.15□□□□□ -0.786e-7■□□□□ 10.7
SUB1P53999 DDX54-206ENST00000549271 756 ntTSL 28.94□□□□□ -0.986e-7■□□□□ 10.7
SUB1P53999 TRRAP-205ENST00000456197 11654 ntAPPRIS ALT2 TSL 1 (best)7.15□□□□□ -1.276e-7■□□□□ 10.7
SUB1P53999 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.276e-7■□□□□ 10.7
SUB1P53999 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.36e-7■□□□□ 10.7
SUB1P53999 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.336e-7■□□□□ 10.7
SUB1P53999 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.416e-7■□□□□ 10.7
SUB1P53999 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.17□□□□□ -1.426e-7■□□□□ 10.7
SUB1P53999 TIAL1-208ENST00000470635 336 ntTSL 35.96□□□□□ -1.466e-7■□□□□ 10.7
SUB1P53999 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.56e-7■□□□□ 10.7
SUB1P53999 TIAL1-209ENST00000470781 1727 ntTSL 24.55□□□□□ -1.686e-7■□□□□ 10.7
SUB1P53999 TIAL1-204ENST00000412524 515 ntTSL 54.16□□□□□ -1.746e-7■□□□□ 10.7
SUB1P53999 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.836e-7■□□□□ 10.7
SUB1P53999 TIAL1-201ENST00000369086 490 ntTSL 22.66□□□□□ -1.986e-7■□□□□ 10.7
SUB1P53999 EIF2S1-203ENST00000554332 534 ntTSL 22.53□□□□□ -26e-7■□□□□ 10.7
SUB1P53999 TRIM28-213ENST00000598355 714 ntTSL 212.16□□□□□ -0.462e-15■□□□□ 10.7
SUB1P53999 MARS-210ENST00000548146 558 ntTSL 47.99□□□□□ -1.132e-11■□□□□ 10.7
SUB1P53999 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-6■□□□□ 10.6
SUB1P53999 HSPD1-213ENST00000486181 648 ntTSL 22.54□□□□□ -27e-16■□□□□ 10.6
SUB1P53999 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.57e-7■□□□□ 10.6
SUB1P53999 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.4■□□□□ 0.227e-7■□□□□ 10.6
SUB1P53999 ATG9A-215ENST00000446716 5245 ntTSL 216.05■□□□□ 0.167e-7■□□□□ 10.6
SUB1P53999 METTL9-210ENST00000570074 447 ntTSL 315.29■□□□□ 0.047e-7■□□□□ 10.6
SUB1P53999 METTL9-203ENST00000562379 701 ntTSL 214.2□□□□□ -0.147e-7■□□□□ 10.6
SUB1P53999 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.367e-7■□□□□ 10.6
SUB1P53999 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.427e-7■□□□□ 10.6
SUB1P53999 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.447e-7■□□□□ 10.6
SUB1P53999 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.597e-7■□□□□ 10.6
SUB1P53999 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC10.59□□□□□ -0.717e-7■□□□□ 10.6
SUB1P53999 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.56□□□□□ -0.727e-7■□□□□ 10.6
SUB1P53999 ATG9A-220ENST00000475339 812 ntTSL 210.49□□□□□ -0.737e-7■□□□□ 10.6
SUB1P53999 SLTM-222ENST00000560494 674 ntTSL 310.49□□□□□ -0.737e-7■□□□□ 10.6
SUB1P53999 ATG9A-203ENST00000409033 3701 ntTSL 1 (best)10.23□□□□□ -0.777e-7■□□□□ 10.6
SUB1P53999 PI4KA-206ENST00000466394 782 ntTSL 510.17□□□□□ -0.787e-7■□□□□ 10.6
SUB1P53999 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.797e-7■□□□□ 10.6
SUB1P53999 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC9.89□□□□□ -0.837e-7■□□□□ 10.6
SUB1P53999 SLTM-203ENST00000432750 2383 ntTSL 59.76□□□□□ -0.857e-7■□□□□ 10.6
SUB1P53999 POLR2H-207ENST00000455712 823 ntTSL 39.66□□□□□ -0.867e-7■□□□□ 10.6
SUB1P53999 MRPL48-214ENST00000544819 742 ntTSL 29.54□□□□□ -0.887e-7■□□□□ 10.6
SUB1P53999 UFC1-204ENST00000473766 888 ntTSL 29.24□□□□□ -0.932e-10■□□□□ 10.6
SUB1P53999 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.947e-7■□□□□ 10.6
SUB1P53999 SLTM-212ENST00000557924 3021 ntTSL 29.14□□□□□ -0.957e-7■□□□□ 10.6
SUB1P53999 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC8.99□□□□□ -0.977e-7■□□□□ 10.6
SUB1P53999 MRPL48-206ENST00000508278 1560 ntTSL 28.95□□□□□ -0.987e-7■□□□□ 10.6
SUB1P53999 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC8.81□□□□□ -17e-7■□□□□ 10.6
SUB1P53999 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.027e-7■□□□□ 10.6
SUB1P53999 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC8.51□□□□□ -1.057e-7■□□□□ 10.6
SUB1P53999 UFC1-203ENST00000467540 803 ntTSL 58.48□□□□□ -1.052e-10■□□□□ 10.6
SUB1P53999 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC8.29□□□□□ -1.087e-7■□□□□ 10.6
SUB1P53999 POLR2H-210ENST00000476003 648 ntTSL 28.29□□□□□ -1.087e-7■□□□□ 10.6
SUB1P53999 MRPL48-209ENST00000540162 1004 ntTSL 58.25□□□□□ -1.097e-7■□□□□ 10.6
SUB1P53999 POLR2H-212ENST00000489043 433 ntTSL 28.22□□□□□ -1.097e-7■□□□□ 10.6
SUB1P53999 DDX3X-218ENST00000629785 3457 ntTSL 58.17□□□□□ -1.17e-7■□□□□ 10.6
SUB1P53999 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC8.15□□□□□ -1.117e-7■□□□□ 10.6
SUB1P53999 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.117e-7■□□□□ 10.6
SUB1P53999 POLR2H-211ENST00000488213 1035 ntTSL 28.05□□□□□ -1.127e-7■□□□□ 10.6
SUB1P53999 UFC1-205ENST00000482672 492 ntTSL 1 (best)7.99□□□□□ -1.132e-10■□□□□ 10.6
SUB1P53999 DDX3X-212ENST00000616050 818 ntTSL 57.93□□□□□ -1.147e-7■□□□□ 10.6
SUB1P53999 DDX3X-221ENST00000630858 3181 ntTSL 57.89□□□□□ -1.157e-7■□□□□ 10.6
SUB1P53999 DDX3X-219ENST00000630255 3289 ntTSL 57.87□□□□□ -1.157e-7■□□□□ 10.6
SUB1P53999 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC7.72□□□□□ -1.177e-7■□□□□ 10.6
SUB1P53999 DDX3X-220ENST00000630370 3120 ntTSL 57.7□□□□□ -1.187e-7■□□□□ 10.6
SUB1P53999 UFC1-206ENST00000483191 617 ntTSL 27.64□□□□□ -1.192e-10■□□□□ 10.6
SUB1P53999 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC7.53□□□□□ -1.27e-7■□□□□ 10.6
SUB1P53999 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)7.5□□□□□ -1.217e-7■□□□□ 10.6
SUB1P53999 SLTM-209ENST00000493062 987 ntTSL 27.12□□□□□ -1.277e-7■□□□□ 10.6
SUB1P53999 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC6.58□□□□□ -1.367e-7■□□□□ 10.6
SUB1P53999 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC6.47□□□□□ -1.377e-7■□□□□ 10.6
SUB1P53999 SLTM-208ENST00000492526 3022 ntTSL 26.13□□□□□ -1.437e-7■□□□□ 10.6
SUB1P53999 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.447e-7■□□□□ 10.6
SUB1P53999 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.442e-10■□□□□ 10.6
SUB1P53999 PSMA5-205ENST00000491287 225 ntTSL 35.72□□□□□ -1.497e-7■□□□□ 10.6
SUB1P53999 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.5□□□□□ -1.537e-7■□□□□ 10.6
SUB1P53999 TFRC-207ENST00000463356 533 ntTSL 35.18□□□□□ -1.587e-7■□□□□ 10.6
SUB1P53999 METTL9-207ENST00000567404 763 ntTSL 34.78□□□□□ -1.647e-7■□□□□ 10.6
SUB1P53999 TFRC-214ENST00000483983 757 ntTSL 24.24□□□□□ -1.737e-7■□□□□ 10.6
SUB1P53999 ACTL6A-204ENST00000461125 457 ntTSL 24.17□□□□□ -1.742e-10■□□□□ 10.6
SUB1P53999 METTL9-204ENST00000562961 785 ntTSL 23.76□□□□□ -1.817e-7■□□□□ 10.6
SUB1P53999 METTL9-208ENST00000568826 376 ntTSL 33.55□□□□□ -1.847e-7■□□□□ 10.6
SUB1P53999 UFC1-202ENST00000463735 339 ntTSL 23.17□□□□□ -1.92e-10■□□□□ 10.6
SUB1P53999 HNRNPC-217ENST00000555176 531 ntTSL 52.78□□□□□ -1.967e-7■□□□□ 10.6
SUB1P53999 GTSF1-205ENST00000548538 594 ntTSL 52.65□□□□□ -1.997e-7■□□□□ 10.6
SUB1P53999 MRPL48-211ENST00000543058 699 ntTSL 32.39□□□□□ -2.037e-7■□□□□ 10.6
Retrieved 100 of 11,644 protein–RNA pairs in 333.2 ms