RNA–Protein interactions for RNA: ENST00000616050.2

DDX3X-212, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-212ENST00000616050 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
DDX3X-212ENST00000616050 ABCC9O60706 1549 aa26.09■■□□□ 1.77
DDX3X-212ENST00000616050 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
DDX3X-212ENST00000616050 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
DDX3X-212ENST00000616050 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
DDX3X-212ENST00000616050 NACADO15069 1562 aa24.44■■□□□ 1.5
DDX3X-212ENST00000616050 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.463e-7■■□□□ 14.4
DDX3X-212ENST00000616050 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
DDX3X-212ENST00000616050 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
DDX3X-212ENST00000616050 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
DDX3X-212ENST00000616050 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
DDX3X-212ENST00000616050 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
DDX3X-212ENST00000616050 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
DDX3X-212ENST00000616050 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
DDX3X-212ENST00000616050 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
DDX3X-212ENST00000616050 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
DDX3X-212ENST00000616050 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
DDX3X-212ENST00000616050 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
DDX3X-212ENST00000616050 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
DDX3X-212ENST00000616050 CUX2O14529 1486 aa22.73■■□□□ 1.23
DDX3X-212ENST00000616050 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
DDX3X-212ENST00000616050 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
DDX3X-212ENST00000616050 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
DDX3X-212ENST00000616050 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
DDX3X-212ENST00000616050 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
DDX3X-212ENST00000616050 NESP48681 1621 aa22.28■■□□□ 1.16
DDX3X-212ENST00000616050 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
DDX3X-212ENST00000616050 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
DDX3X-212ENST00000616050 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
DDX3X-212ENST00000616050 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
DDX3X-212ENST00000616050 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
DDX3X-212ENST00000616050 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
DDX3X-212ENST00000616050 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
DDX3X-212ENST00000616050 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
DDX3X-212ENST00000616050 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
DDX3X-212ENST00000616050 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
DDX3X-212ENST00000616050 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
DDX3X-212ENST00000616050 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
DDX3X-212ENST00000616050 WDR62O43379 1518 aa21.8■■□□□ 1.08
DDX3X-212ENST00000616050 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
DDX3X-212ENST00000616050 WIZO95785 1651 aa21.6■■□□□ 1.05
DDX3X-212ENST00000616050 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
DDX3X-212ENST00000616050 FANCD2Q9BXW9 1451 aa21.57■■□□□ 1.04
DDX3X-212ENST00000616050 CFTRP13569 1480 aa21.51■■□□□ 1.03
DDX3X-212ENST00000616050 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
DDX3X-212ENST00000616050 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
DDX3X-212ENST00000616050 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
DDX3X-212ENST00000616050 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
DDX3X-212ENST00000616050 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
DDX3X-212ENST00000616050 PRDM2Q13029 1718 aa21.28■■□□□ 1
DDX3X-212ENST00000616050 RSF1Q96T23 1441 aaPredicted RBP21.28■■□□□ 1
DDX3X-212ENST00000616050 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
DDX3X-212ENST00000616050 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
DDX3X-212ENST00000616050 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
DDX3X-212ENST00000616050 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
DDX3X-212ENST00000616050 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
DDX3X-212ENST00000616050 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
DDX3X-212ENST00000616050 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
DDX3X-212ENST00000616050 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
DDX3X-212ENST00000616050 CHD1O14646 1710 aa21.03■□□□□ 0.96
DDX3X-212ENST00000616050 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.95
DDX3X-212ENST00000616050 ARAP1Q96P48 1450 aa21■□□□□ 0.95
DDX3X-212ENST00000616050 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
DDX3X-212ENST00000616050 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
DDX3X-212ENST00000616050 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.953e-7■■■■■ 30.5
DDX3X-212ENST00000616050 FBLN2P98095 1184 aa20.89■□□□□ 0.93
DDX3X-212ENST00000616050 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
DDX3X-212ENST00000616050 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
DDX3X-212ENST00000616050 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
DDX3X-212ENST00000616050 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
DDX3X-212ENST00000616050 SOGA1O94964 1423 aa20.78■□□□□ 0.92
DDX3X-212ENST00000616050 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
DDX3X-212ENST00000616050 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
DDX3X-212ENST00000616050 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
DDX3X-212ENST00000616050 MAGI1Q96QZ7 1491 aaPredicted RBP20.71■□□□□ 0.91
DDX3X-212ENST00000616050 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
DDX3X-212ENST00000616050 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
DDX3X-212ENST00000616050 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
DDX3X-212ENST00000616050 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
DDX3X-212ENST00000616050 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
DDX3X-212ENST00000616050 CUX1P39880 1505 aa20.58■□□□□ 0.89
DDX3X-212ENST00000616050 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
DDX3X-212ENST00000616050 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
DDX3X-212ENST00000616050 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
DDX3X-212ENST00000616050 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
DDX3X-212ENST00000616050 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
DDX3X-212ENST00000616050 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
DDX3X-212ENST00000616050 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
DDX3X-212ENST00000616050 NUP160Q12769 1436 aa20.35■□□□□ 0.85
DDX3X-212ENST00000616050 SHROOM2Q13796 1616 aa20.32■□□□□ 0.84
DDX3X-212ENST00000616050 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
DDX3X-212ENST00000616050 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
DDX3X-212ENST00000616050 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
DDX3X-212ENST00000616050 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
DDX3X-212ENST00000616050 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
DDX3X-212ENST00000616050 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
DDX3X-212ENST00000616050 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
DDX3X-212ENST00000616050 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
DDX3X-212ENST00000616050 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
DDX3X-212ENST00000616050 ABCC10Q5T3U5 1492 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms