RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 NISCHQ9Y2I1 1504 aa31.86■■■□□ 2.69
TCF3-204ENST00000453954 SHROOM4Q9ULL8 1493 aa29.79■■■□□ 2.36
TCF3-204ENST00000453954 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
TCF3-204ENST00000453954 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
TCF3-204ENST00000453954 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.23
TCF3-204ENST00000453954 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.2
TCF3-204ENST00000453954 HRCP23327 699 aa28.63■■■□□ 2.17
TCF3-204ENST00000453954 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
TCF3-204ENST00000453954 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
TCF3-204ENST00000453954 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.1
TCF3-204ENST00000453954 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
TCF3-204ENST00000453954 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
TCF3-204ENST00000453954 TRIM26Q12899 539 aaPredicted RBP27.45■■□□□ 1.98
TCF3-204ENST00000453954 TTBK1Q5TCY1 1321 aaPredicted RBP27.38■■□□□ 1.97
TCF3-204ENST00000453954 SCAF1Q9H7N4 1312 aaKnown RBP27.12■■□□□ 1.93
TCF3-204ENST00000453954 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
TCF3-204ENST00000453954 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
TCF3-204ENST00000453954 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
TCF3-204ENST00000453954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.94■■□□□ 1.9
TCF3-204ENST00000453954 CCER1Q8TC90 406 aaPredicted RBP26.92■■□□□ 1.9
TCF3-204ENST00000453954 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
TCF3-204ENST00000453954 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
TCF3-204ENST00000453954 YTHDC1Q96MU7 727 aaKnown RBP26.82■■□□□ 1.88
TCF3-204ENST00000453954 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
TCF3-204ENST00000453954 GTF3C3Q9Y5Q9 886 aa26.65■■□□□ 1.86
TCF3-204ENST00000453954 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
TCF3-204ENST00000453954 CENPBP07199 599 aaPredicted RBP26.52■■□□□ 1.84
TCF3-204ENST00000453954 ACIN1Q9UKV3 1341 aaKnown RBP26.5■■□□□ 1.83
TCF3-204ENST00000453954 DIEXFQ68CQ4 756 aaKnown RBP26.48■■□□□ 1.83
TCF3-204ENST00000453954 RANGAP1P46060 587 aaPredicted RBP26.28■■□□□ 1.8
TCF3-204ENST00000453954 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
TCF3-204ENST00000453954 UBTFP17480 764 aaKnown RBP26.08■■□□□ 1.77
TCF3-204ENST00000453954 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
TCF3-204ENST00000453954 ZNF316A6NFI3 1004 aaPredicted RBP25.82■■□□□ 1.72
TCF3-204ENST00000453954 MIER1Q8N108 512 aa25.81■■□□□ 1.72
TCF3-204ENST00000453954 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
TCF3-204ENST00000453954 MYT1Q01538 1121 aa25.74■■□□□ 1.71
TCF3-204ENST00000453954 ABCC9O60706 1549 aa25.7■■□□□ 1.71
TCF3-204ENST00000453954 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
TCF3-204ENST00000453954 APLP2Q06481 763 aa25.67■■□□□ 1.7
TCF3-204ENST00000453954 BCANQ96GW7 911 aa25.55■■□□□ 1.68
TCF3-204ENST00000453954 ITGAEP38570 1179 aa25.49■■□□□ 1.67
TCF3-204ENST00000453954 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
TCF3-204ENST00000453954 CSRNP3Q8WYN3 585 aa25.3■■□□□ 1.64
TCF3-204ENST00000453954 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
TCF3-204ENST00000453954 SOGA1O94964 1423 aa25.18■■□□□ 1.62
TCF3-204ENST00000453954 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.62
TCF3-204ENST00000453954 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
TCF3-204ENST00000453954 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
TCF3-204ENST00000453954 SUPT16HQ9Y5B9 1047 aaKnown RBP25.1■■□□□ 1.61
TCF3-204ENST00000453954 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.61e-6■□□□□ 9.3
TCF3-204ENST00000453954 ATP1B4Q9UN42 357 aaPredicted RBP25.03■■□□□ 1.6
TCF3-204ENST00000453954 WIZO95785 1651 aa25■■□□□ 1.59
TCF3-204ENST00000453954 KCNH8Q96L42 1107 aa24.99■■□□□ 1.59
TCF3-204ENST00000453954 HIRIP3Q9BW71 556 aaPredicted RBP24.99■■□□□ 1.59
TCF3-204ENST00000453954 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
TCF3-204ENST00000453954 FKBP8Q14318 412 aa24.97■■□□□ 1.59
TCF3-204ENST00000453954 NEFLP07196 543 aa24.91■■□□□ 1.58
TCF3-204ENST00000453954 NACADO15069 1562 aa24.88■■□□□ 1.57
TCF3-204ENST00000453954 TSHZ2Q9NRE2 1034 aa24.88■■□□□ 1.57
TCF3-204ENST00000453954 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
TCF3-204ENST00000453954 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
TCF3-204ENST00000453954 TRIM52Q96A61 297 aa24.86■■□□□ 1.57
TCF3-204ENST00000453954 ANP32EQ9BTT0 268 aa24.79■■□□□ 1.56
TCF3-204ENST00000453954 CLIP1P30622 1438 aa24.78■■□□□ 1.56
TCF3-204ENST00000453954 ERICH6Q7L0X2 663 aa24.77■■□□□ 1.56
TCF3-204ENST00000453954 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
TCF3-204ENST00000453954 IRX6P78412 446 aaPredicted RBP24.73■■□□□ 1.55
TCF3-204ENST00000453954 BCL11AQ9H165 835 aa24.7■■□□□ 1.54
TCF3-204ENST00000453954 WRNQ14191 1432 aaPredicted RBP eCLIP24.7■■□□□ 1.541e-6■■■■■ 58.5
TCF3-204ENST00000453954 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
TCF3-204ENST00000453954 GOLGA3Q08378 1498 aa24.66■■□□□ 1.54
TCF3-204ENST00000453954 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.53
TCF3-204ENST00000453954 SIN3AQ96ST3 1273 aa24.56■■□□□ 1.52
TCF3-204ENST00000453954 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
TCF3-204ENST00000453954 RBM19Q9Y4C8 960 aaKnown RBP24.46■■□□□ 1.51
TCF3-204ENST00000453954 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
TCF3-204ENST00000453954 ANP32CO43423 234 aa24.43■■□□□ 1.5
TCF3-204ENST00000453954 SENP3-EIF4A1A0A087X0R7 540 aa24.41■■□□□ 1.5
TCF3-204ENST00000453954 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
TCF3-204ENST00000453954 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
TCF3-204ENST00000453954 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
TCF3-204ENST00000453954 EEA1Q15075 1411 aa24.37■■□□□ 1.49
TCF3-204ENST00000453954 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
TCF3-204ENST00000453954 RAPGEF2Q9Y4G8 1499 aa24.35■■□□□ 1.49
TCF3-204ENST00000453954 HNRNPUQ00839 825 aaKnown RBP eCLIP24.35■■□□□ 1.49
TCF3-204ENST00000453954 POLR3GLQ9BT43 218 aa24.3■■□□□ 1.48
TCF3-204ENST00000453954 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
TCF3-204ENST00000453954 NBR1Q14596 966 aa24.21■■□□□ 1.47
TCF3-204ENST00000453954 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
TCF3-204ENST00000453954 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
TCF3-204ENST00000453954 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
TCF3-204ENST00000453954 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
TCF3-204ENST00000453954 FAM9BQ8IZU0 186 aa24.14■■□□□ 1.46
TCF3-204ENST00000453954 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
TCF3-204ENST00000453954 CCNB3Q8WWL7 1395 aa24.13■■□□□ 1.45
TCF3-204ENST00000453954 B4GALNT3Q6L9W6 998 aa24.05■■□□□ 1.44
TCF3-204ENST00000453954 ARID3CA6NKF2 412 aa24.04■■□□□ 1.44
TCF3-204ENST00000453954 MSH5O43196 834 aa24.03■■□□□ 1.44
TCF3-204ENST00000453954 KIF21BO75037 1637 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms