RNA–Protein interactions for RNA: ENST00000630255.2

DDX3X-219, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-219ENST00000630255 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
DDX3X-219ENST00000630255 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
DDX3X-219ENST00000630255 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
DDX3X-219ENST00000630255 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
DDX3X-219ENST00000630255 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
DDX3X-219ENST00000630255 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
DDX3X-219ENST00000630255 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
DDX3X-219ENST00000630255 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
DDX3X-219ENST00000630255 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
DDX3X-219ENST00000630255 HRCP23327 699 aa16.59■□□□□ 0.25
DDX3X-219ENST00000630255 ABCC9O60706 1549 aa16.26■□□□□ 0.19
DDX3X-219ENST00000630255 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
DDX3X-219ENST00000630255 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
DDX3X-219ENST00000630255 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
DDX3X-219ENST00000630255 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
DDX3X-219ENST00000630255 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
DDX3X-219ENST00000630255 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
DDX3X-219ENST00000630255 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
DDX3X-219ENST00000630255 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
DDX3X-219ENST00000630255 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
DDX3X-219ENST00000630255 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.12
DDX3X-219ENST00000630255 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
DDX3X-219ENST00000630255 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
DDX3X-219ENST00000630255 NACADO15069 1562 aa15.62■□□□□ 0.09
DDX3X-219ENST00000630255 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
DDX3X-219ENST00000630255 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
DDX3X-219ENST00000630255 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
DDX3X-219ENST00000630255 WIZO95785 1651 aa15.59■□□□□ 0.09
DDX3X-219ENST00000630255 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
DDX3X-219ENST00000630255 MYT1Q01538 1121 aa15.49■□□□□ 0.07
DDX3X-219ENST00000630255 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
DDX3X-219ENST00000630255 FAM9AQ8IZU1 332 aaPredicted RBP15.38■□□□□ 0.05
DDX3X-219ENST00000630255 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
DDX3X-219ENST00000630255 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
DDX3X-219ENST00000630255 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
DDX3X-219ENST00000630255 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
DDX3X-219ENST00000630255 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
DDX3X-219ENST00000630255 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
DDX3X-219ENST00000630255 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
DDX3X-219ENST00000630255 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
DDX3X-219ENST00000630255 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
DDX3X-219ENST00000630255 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
DDX3X-219ENST00000630255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
DDX3X-219ENST00000630255 TNIKQ9UKE5 1360 aa15.15■□□□□ 0.02
DDX3X-219ENST00000630255 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
DDX3X-219ENST00000630255 EEA1Q15075 1411 aa15.15■□□□□ 0.02
DDX3X-219ENST00000630255 NEUROD1Q13562 356 aa15.12■□□□□ 0.01
DDX3X-219ENST00000630255 CCER1Q8TC90 406 aaPredicted RBP15.11■□□□□ 0.01
DDX3X-219ENST00000630255 SOGA1O94964 1423 aa15.1■□□□□ 0.01
DDX3X-219ENST00000630255 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
DDX3X-219ENST00000630255 KIF21BO75037 1637 aa15.07■□□□□ 0
DDX3X-219ENST00000630255 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
DDX3X-219ENST00000630255 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
DDX3X-219ENST00000630255 DIEXFQ68CQ4 756 aaKnown RBP15.05■□□□□ 0
DDX3X-219ENST00000630255 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
DDX3X-219ENST00000630255 GOLGA3Q08378 1498 aa15.03■□□□□ -0
DDX3X-219ENST00000630255 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
DDX3X-219ENST00000630255 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
DDX3X-219ENST00000630255 GTF3C3Q9Y5Q9 886 aa14.96□□□□□ -0.02
DDX3X-219ENST00000630255 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
DDX3X-219ENST00000630255 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
DDX3X-219ENST00000630255 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
DDX3X-219ENST00000630255 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
DDX3X-219ENST00000630255 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
DDX3X-219ENST00000630255 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
DDX3X-219ENST00000630255 VPS8Q8N3P4 1428 aa14.85□□□□□ -0.03
DDX3X-219ENST00000630255 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
DDX3X-219ENST00000630255 CLIP1P30622 1438 aa14.8□□□□□ -0.04
DDX3X-219ENST00000630255 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
DDX3X-219ENST00000630255 TOP2BQ02880 1626 aa14.79□□□□□ -0.04
DDX3X-219ENST00000630255 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
DDX3X-219ENST00000630255 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
DDX3X-219ENST00000630255 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
DDX3X-219ENST00000630255 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
DDX3X-219ENST00000630255 MIER1Q8N108 512 aa14.71□□□□□ -0.05
DDX3X-219ENST00000630255 ARAP1Q96P48 1450 aa14.67□□□□□ -0.06
DDX3X-219ENST00000630255 CLSPNQ9HAW4 1339 aa14.66□□□□□ -0.06
DDX3X-219ENST00000630255 CUX2O14529 1486 aa14.66□□□□□ -0.06
DDX3X-219ENST00000630255 PRXQ9BXM0 1461 aa14.65□□□□□ -0.06
DDX3X-219ENST00000630255 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
DDX3X-219ENST00000630255 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
DDX3X-219ENST00000630255 RRBP1Q9P2E9 1410 aaKnown RBP14.6□□□□□ -0.07
DDX3X-219ENST00000630255 APLP2Q06481 763 aa14.59□□□□□ -0.07
DDX3X-219ENST00000630255 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.07
DDX3X-219ENST00000630255 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
DDX3X-219ENST00000630255 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
DDX3X-219ENST00000630255 CUX1P39880 1505 aa14.52□□□□□ -0.09
DDX3X-219ENST00000630255 HMGXB3Q12766 1538 aa14.52□□□□□ -0.09
DDX3X-219ENST00000630255 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.093e-7■■□□□ 14.4
DDX3X-219ENST00000630255 MAPKBP1O60336 1514 aa14.46□□□□□ -0.09
DDX3X-219ENST00000630255 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
DDX3X-219ENST00000630255 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
DDX3X-219ENST00000630255 BCL11AQ9H165 835 aa14.43□□□□□ -0.1
DDX3X-219ENST00000630255 CFAP43Q8NDM7 1665 aa14.43□□□□□ -0.1
DDX3X-219ENST00000630255 KANK4Q5T7N3 995 aaPredicted RBP14.42□□□□□ -0.1
DDX3X-219ENST00000630255 TIAM1Q13009 1591 aa14.42□□□□□ -0.1
DDX3X-219ENST00000630255 SUPT16HQ9Y5B9 1047 aaKnown RBP14.42□□□□□ -0.1
DDX3X-219ENST00000630255 ADRA2BP18089 450 aa14.4□□□□□ -0.1
DDX3X-219ENST00000630255 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
DDX3X-219ENST00000630255 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms