RNA–Protein interactions for RNA: ENST00000493062.5

SLTM-209, Transcript of SAFB like transcription modulator, humanhuman

TSL 2

Gene SLTM, Length 987 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-209ENST00000493062 AEBP2Q6ZN18 517 aaPredicted RBP30.96■■■□□ 2.55
SLTM-209ENST00000493062 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
SLTM-209ENST00000493062 SENP3Q9H4L4 574 aaPredicted RBP26.29■■□□□ 1.8
SLTM-209ENST00000493062 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
SLTM-209ENST00000493062 NISCHQ9Y2I1 1504 aa25.95■■□□□ 1.74
SLTM-209ENST00000493062 FOXD1Q16676 465 aa24.48■■□□□ 1.51
SLTM-209ENST00000493062 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
SLTM-209ENST00000493062 ABCC9O60706 1549 aa23.79■■□□□ 1.4
SLTM-209ENST00000493062 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
SLTM-209ENST00000493062 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
SLTM-209ENST00000493062 ADRA2BP18089 450 aa23.22■■□□□ 1.31
SLTM-209ENST00000493062 PIAS4Q8N2W9 510 aaPredicted RBP23■■□□□ 1.27
SLTM-209ENST00000493062 MSH5O43196 834 aa22.71■■□□□ 1.23
SLTM-209ENST00000493062 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
SLTM-209ENST00000493062 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
SLTM-209ENST00000493062 NACADO15069 1562 aa22.25■■□□□ 1.15
SLTM-209ENST00000493062 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
SLTM-209ENST00000493062 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
SLTM-209ENST00000493062 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
SLTM-209ENST00000493062 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
SLTM-209ENST00000493062 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
SLTM-209ENST00000493062 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
SLTM-209ENST00000493062 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
SLTM-209ENST00000493062 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.03
SLTM-209ENST00000493062 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
SLTM-209ENST00000493062 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
SLTM-209ENST00000493062 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
SLTM-209ENST00000493062 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
SLTM-209ENST00000493062 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
SLTM-209ENST00000493062 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
SLTM-209ENST00000493062 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
SLTM-209ENST00000493062 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
SLTM-209ENST00000493062 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
SLTM-209ENST00000493062 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
SLTM-209ENST00000493062 CUX2O14529 1486 aa20.63■□□□□ 0.89
SLTM-209ENST00000493062 CNKSR2Q8WXI2 1034 aa20.6■□□□□ 0.89
SLTM-209ENST00000493062 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
SLTM-209ENST00000493062 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
SLTM-209ENST00000493062 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
SLTM-209ENST00000493062 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
SLTM-209ENST00000493062 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
SLTM-209ENST00000493062 HMGXB3Q12766 1538 aa20.36■□□□□ 0.85
SLTM-209ENST00000493062 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
SLTM-209ENST00000493062 NESP48681 1621 aa20.35■□□□□ 0.85
SLTM-209ENST00000493062 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
SLTM-209ENST00000493062 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
SLTM-209ENST00000493062 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
SLTM-209ENST00000493062 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
SLTM-209ENST00000493062 KCNA4P22459 653 aa20.19■□□□□ 0.82
SLTM-209ENST00000493062 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
SLTM-209ENST00000493062 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
SLTM-209ENST00000493062 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
SLTM-209ENST00000493062 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
SLTM-209ENST00000493062 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
SLTM-209ENST00000493062 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
SLTM-209ENST00000493062 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
SLTM-209ENST00000493062 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
SLTM-209ENST00000493062 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
SLTM-209ENST00000493062 MRC2Q9UBG0 1479 aa19.87■□□□□ 0.77
SLTM-209ENST00000493062 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
SLTM-209ENST00000493062 WDR62O43379 1518 aa19.84■□□□□ 0.77
SLTM-209ENST00000493062 WIZO95785 1651 aa19.8■□□□□ 0.76
SLTM-209ENST00000493062 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
SLTM-209ENST00000493062 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
SLTM-209ENST00000493062 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
SLTM-209ENST00000493062 CFTRP13569 1480 aa19.58■□□□□ 0.72
SLTM-209ENST00000493062 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
SLTM-209ENST00000493062 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
SLTM-209ENST00000493062 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
SLTM-209ENST00000493062 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
SLTM-209ENST00000493062 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
SLTM-209ENST00000493062 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
SLTM-209ENST00000493062 RNF39Q9H2S5 420 aa19.43■□□□□ 0.7
SLTM-209ENST00000493062 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
SLTM-209ENST00000493062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.41■□□□□ 0.75e-8■■□□□ 13.1
SLTM-209ENST00000493062 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
SLTM-209ENST00000493062 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
SLTM-209ENST00000493062 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
SLTM-209ENST00000493062 TOPBP1Q92547 1522 aa19.27■□□□□ 0.68
SLTM-209ENST00000493062 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
SLTM-209ENST00000493062 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
SLTM-209ENST00000493062 CHD1O14646 1710 aa19.25■□□□□ 0.67
SLTM-209ENST00000493062 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
SLTM-209ENST00000493062 CYB5RLQ6IPT4 315 aa19.2■□□□□ 0.66
SLTM-209ENST00000493062 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
SLTM-209ENST00000493062 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
SLTM-209ENST00000493062 C1QBPQ07021 282 aaKnown RBP19.15■□□□□ 0.66
SLTM-209ENST00000493062 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.66
SLTM-209ENST00000493062 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
SLTM-209ENST00000493062 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
SLTM-209ENST00000493062 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.654e-6■■■□□ 17.5
SLTM-209ENST00000493062 ARAP1Q96P48 1450 aa19.12■□□□□ 0.65
SLTM-209ENST00000493062 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
SLTM-209ENST00000493062 FBLN2P98095 1184 aa19.08■□□□□ 0.64
SLTM-209ENST00000493062 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
SLTM-209ENST00000493062 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
SLTM-209ENST00000493062 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
SLTM-209ENST00000493062 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
SLTM-209ENST00000493062 SOGA1O94964 1423 aa18.94■□□□□ 0.62
SLTM-209ENST00000493062 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms