RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
DDX3X-221ENST00000630858 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
DDX3X-221ENST00000630858 HRCP23327 699 aa16.61■□□□□ 0.25
DDX3X-221ENST00000630858 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
DDX3X-221ENST00000630858 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
DDX3X-221ENST00000630858 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
DDX3X-221ENST00000630858 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
DDX3X-221ENST00000630858 PPARGC1BQ86YN6 1023 aaKnown RBP16.36■□□□□ 0.21
DDX3X-221ENST00000630858 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
DDX3X-221ENST00000630858 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
DDX3X-221ENST00000630858 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
DDX3X-221ENST00000630858 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
DDX3X-221ENST00000630858 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
DDX3X-221ENST00000630858 ABCC9O60706 1549 aa15.88■□□□□ 0.13
DDX3X-221ENST00000630858 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
DDX3X-221ENST00000630858 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
DDX3X-221ENST00000630858 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
DDX3X-221ENST00000630858 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
DDX3X-221ENST00000630858 NACADO15069 1562 aa15.6■□□□□ 0.09
DDX3X-221ENST00000630858 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
DDX3X-221ENST00000630858 RB1CC1Q8TDY2 1594 aa15.46■□□□□ 0.07
DDX3X-221ENST00000630858 MYT1Q01538 1121 aa15.39■□□□□ 0.05
DDX3X-221ENST00000630858 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
DDX3X-221ENST00000630858 ACIN1Q9UKV3 1341 aaKnown RBP15.36■□□□□ 0.05
DDX3X-221ENST00000630858 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
DDX3X-221ENST00000630858 FAM9AQ8IZU1 332 aaPredicted RBP15.3■□□□□ 0.04
DDX3X-221ENST00000630858 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
DDX3X-221ENST00000630858 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
DDX3X-221ENST00000630858 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
DDX3X-221ENST00000630858 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
DDX3X-221ENST00000630858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
DDX3X-221ENST00000630858 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
DDX3X-221ENST00000630858 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
DDX3X-221ENST00000630858 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
DDX3X-221ENST00000630858 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
DDX3X-221ENST00000630858 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
DDX3X-221ENST00000630858 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.013e-7■■□□□ 14.4
DDX3X-221ENST00000630858 YTHDC1Q96MU7 727 aaKnown RBP15.01□□□□□ -0.01
DDX3X-221ENST00000630858 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
DDX3X-221ENST00000630858 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
DDX3X-221ENST00000630858 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
DDX3X-221ENST00000630858 WIZO95785 1651 aa14.86□□□□□ -0.03
DDX3X-221ENST00000630858 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
DDX3X-221ENST00000630858 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
DDX3X-221ENST00000630858 MIER1Q8N108 512 aa14.73□□□□□ -0.05
DDX3X-221ENST00000630858 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
DDX3X-221ENST00000630858 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
DDX3X-221ENST00000630858 EIF4G1Q04637 1599 aaKnown RBP14.58□□□□□ -0.07
DDX3X-221ENST00000630858 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.07
DDX3X-221ENST00000630858 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
DDX3X-221ENST00000630858 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
DDX3X-221ENST00000630858 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
DDX3X-221ENST00000630858 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
DDX3X-221ENST00000630858 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
DDX3X-221ENST00000630858 SUPT16HQ9Y5B9 1047 aaKnown RBP14.5□□□□□ -0.09
DDX3X-221ENST00000630858 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
DDX3X-221ENST00000630858 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
DDX3X-221ENST00000630858 UBTFP17480 764 aaKnown RBP14.48□□□□□ -0.09
DDX3X-221ENST00000630858 ANP32EQ9BTT0 268 aa14.48□□□□□ -0.09
DDX3X-221ENST00000630858 BCL11AQ9H165 835 aa14.47□□□□□ -0.09
DDX3X-221ENST00000630858 TSHZ2Q9NRE2 1034 aa14.43□□□□□ -0.1
DDX3X-221ENST00000630858 NCAPD3P42695 1498 aa14.43□□□□□ -0.1
DDX3X-221ENST00000630858 CLSPNQ9HAW4 1339 aa14.4□□□□□ -0.1
DDX3X-221ENST00000630858 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
DDX3X-221ENST00000630858 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
DDX3X-221ENST00000630858 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
DDX3X-221ENST00000630858 CSRNP3Q8WYN3 585 aa14.34□□□□□ -0.11
DDX3X-221ENST00000630858 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
DDX3X-221ENST00000630858 SOGA1O94964 1423 aa14.33□□□□□ -0.12
DDX3X-221ENST00000630858 BCANQ96GW7 911 aa14.33□□□□□ -0.12
DDX3X-221ENST00000630858 APLP2Q06481 763 aa14.28□□□□□ -0.12
DDX3X-221ENST00000630858 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
DDX3X-221ENST00000630858 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
DDX3X-221ENST00000630858 FKBP8Q14318 412 aa14.19□□□□□ -0.14
DDX3X-221ENST00000630858 KCNH8Q96L42 1107 aa14.17□□□□□ -0.14
DDX3X-221ENST00000630858 EEA1Q15075 1411 aa14.16□□□□□ -0.14
DDX3X-221ENST00000630858 CFTRP13569 1480 aa14.13□□□□□ -0.15
DDX3X-221ENST00000630858 CLIP1P30622 1438 aa14.13□□□□□ -0.15
DDX3X-221ENST00000630858 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
DDX3X-221ENST00000630858 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
DDX3X-221ENST00000630858 NEFLP07196 543 aa14.1□□□□□ -0.15
DDX3X-221ENST00000630858 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
DDX3X-221ENST00000630858 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
DDX3X-221ENST00000630858 ITGAEP38570 1179 aa14.08□□□□□ -0.15
DDX3X-221ENST00000630858 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
DDX3X-221ENST00000630858 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
DDX3X-221ENST00000630858 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
DDX3X-221ENST00000630858 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
DDX3X-221ENST00000630858 ERICH6Q7L0X2 663 aa14.01□□□□□ -0.17
DDX3X-221ENST00000630858 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
DDX3X-221ENST00000630858 NESP48681 1621 aa14□□□□□ -0.17
DDX3X-221ENST00000630858 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
DDX3X-221ENST00000630858 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
DDX3X-221ENST00000630858 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
DDX3X-221ENST00000630858 CUX1P39880 1505 aa13.98□□□□□ -0.17
DDX3X-221ENST00000630858 MSH5O43196 834 aa13.95□□□□□ -0.18
DDX3X-221ENST00000630858 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
DDX3X-221ENST00000630858 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
DDX3X-221ENST00000630858 RAPGEF2Q9Y4G8 1499 aa13.92□□□□□ -0.18
DDX3X-221ENST00000630858 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms