RNA–Protein interactions for RNA: ENST00000380516.6

SLTM-202, Transcript of SAFB like transcription modulator, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SLTM, Length 4,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-202ENST00000380516 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.72
SLTM-202ENST00000380516 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
SLTM-202ENST00000380516 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
SLTM-202ENST00000380516 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
SLTM-202ENST00000380516 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
SLTM-202ENST00000380516 ABCC9O60706 1549 aa16.82■□□□□ 0.28
SLTM-202ENST00000380516 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
SLTM-202ENST00000380516 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
SLTM-202ENST00000380516 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
SLTM-202ENST00000380516 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
SLTM-202ENST00000380516 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
SLTM-202ENST00000380516 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
SLTM-202ENST00000380516 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
SLTM-202ENST00000380516 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
SLTM-202ENST00000380516 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
SLTM-202ENST00000380516 PCGF6Q9BYE7 350 aa16.24■□□□□ 0.19
SLTM-202ENST00000380516 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
SLTM-202ENST00000380516 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
SLTM-202ENST00000380516 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
SLTM-202ENST00000380516 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
SLTM-202ENST00000380516 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
SLTM-202ENST00000380516 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
SLTM-202ENST00000380516 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
SLTM-202ENST00000380516 APLP2Q06481 763 aa15.52■□□□□ 0.07
SLTM-202ENST00000380516 ITGAEP38570 1179 aa15.47■□□□□ 0.07
SLTM-202ENST00000380516 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
SLTM-202ENST00000380516 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
SLTM-202ENST00000380516 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SLTM-202ENST00000380516 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
SLTM-202ENST00000380516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
SLTM-202ENST00000380516 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
SLTM-202ENST00000380516 NACADO15069 1562 aa15.37■□□□□ 0.05
SLTM-202ENST00000380516 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
SLTM-202ENST00000380516 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
SLTM-202ENST00000380516 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
SLTM-202ENST00000380516 HRCP23327 699 aa15.3■□□□□ 0.04
SLTM-202ENST00000380516 WIZO95785 1651 aa15.29■□□□□ 0.04
SLTM-202ENST00000380516 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
SLTM-202ENST00000380516 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
SLTM-202ENST00000380516 FBLN2P98095 1184 aa15.14■□□□□ 0.01
SLTM-202ENST00000380516 SOGA1O94964 1423 aa15.12■□□□□ 0.01
SLTM-202ENST00000380516 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
SLTM-202ENST00000380516 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
SLTM-202ENST00000380516 BAZ1BQ9UIG0 1483 aaKnown RBP15.06■□□□□ 0
SLTM-202ENST00000380516 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
SLTM-202ENST00000380516 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
SLTM-202ENST00000380516 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
SLTM-202ENST00000380516 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
SLTM-202ENST00000380516 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
SLTM-202ENST00000380516 CNGB1Q14028 1251 aaPredicted RBP14.93□□□□□ -0.02
SLTM-202ENST00000380516 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
SLTM-202ENST00000380516 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
SLTM-202ENST00000380516 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
SLTM-202ENST00000380516 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
SLTM-202ENST00000380516 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
SLTM-202ENST00000380516 ZEB1P37275 1124 aaPredicted RBP14.8□□□□□ -0.04
SLTM-202ENST00000380516 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
SLTM-202ENST00000380516 CLIP1P30622 1438 aa14.75□□□□□ -0.05
SLTM-202ENST00000380516 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
SLTM-202ENST00000380516 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
SLTM-202ENST00000380516 MYT1Q01538 1121 aa14.71□□□□□ -0.05
SLTM-202ENST00000380516 CHIC2Q9UKJ5 165 aa14.7□□□□□ -0.06
SLTM-202ENST00000380516 TDRD9Q8NDG6 1382 aaKnown RBP14.7□□□□□ -0.06
SLTM-202ENST00000380516 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
SLTM-202ENST00000380516 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
SLTM-202ENST00000380516 ZNF777Q9ULD5 760 aaPredicted RBP14.68□□□□□ -0.06
SLTM-202ENST00000380516 MYT1LQ9UL68 1186 aa14.67□□□□□ -0.06
SLTM-202ENST00000380516 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
SLTM-202ENST00000380516 CUX2O14529 1486 aa14.66□□□□□ -0.06
SLTM-202ENST00000380516 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
SLTM-202ENST00000380516 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
SLTM-202ENST00000380516 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
SLTM-202ENST00000380516 DIEXFQ68CQ4 756 aaKnown RBP14.63□□□□□ -0.07
SLTM-202ENST00000380516 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
SLTM-202ENST00000380516 NESP48681 1621 aa14.63□□□□□ -0.07
SLTM-202ENST00000380516 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
SLTM-202ENST00000380516 TNIKQ9UKE5 1360 aa14.59□□□□□ -0.07
SLTM-202ENST00000380516 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
SLTM-202ENST00000380516 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
SLTM-202ENST00000380516 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
SLTM-202ENST00000380516 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
SLTM-202ENST00000380516 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
SLTM-202ENST00000380516 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.09
SLTM-202ENST00000380516 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
SLTM-202ENST00000380516 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
SLTM-202ENST00000380516 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
SLTM-202ENST00000380516 RRP7BPQ9NSQ0 103 aa14.5□□□□□ -0.09
SLTM-202ENST00000380516 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
SLTM-202ENST00000380516 SIN3AQ96ST3 1273 aa14.44□□□□□ -0.1
SLTM-202ENST00000380516 KCNH8Q96L42 1107 aa14.43□□□□□ -0.1
SLTM-202ENST00000380516 SENP3-EIF4A1A0A087X0R7 540 aa14.43□□□□□ -0.1
SLTM-202ENST00000380516 EEA1Q15075 1411 aa14.43□□□□□ -0.1
SLTM-202ENST00000380516 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
SLTM-202ENST00000380516 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
SLTM-202ENST00000380516 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
SLTM-202ENST00000380516 NCAPD3P42695 1498 aa14.4□□□□□ -0.1
SLTM-202ENST00000380516 FHOD3Q2V2M9 1422 aa14.39□□□□□ -0.11
SLTM-202ENST00000380516 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
SLTM-202ENST00000380516 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
SLTM-202ENST00000380516 FOXD1Q16676 465 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 743.3 ms