RNA–Protein interactions for RNA: ENST00000555176.5

HNRNPC-217, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-217ENST00000555176 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-217ENST00000555176 CHIC1Q5VXU3 224 aa12.14□□□□□ -0.47
HNRNPC-217ENST00000555176 SENP3Q9H4L4 574 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-217ENST00000555176 PHF23Q9BUL5 403 aaPredicted RBP10.95□□□□□ -0.66
HNRNPC-217ENST00000555176 POTEDQ86YR6 584 aa10.76□□□□□ -0.69
HNRNPC-217ENST00000555176 FOXD1Q16676 465 aa10.47□□□□□ -0.73
HNRNPC-217ENST00000555176 MSH5O43196 834 aa10.05□□□□□ -0.8
HNRNPC-217ENST00000555176 PIAS4Q8N2W9 510 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-217ENST00000555176 PPP6R1Q9UPN7 881 aa9.34□□□□□ -0.91
HNRNPC-217ENST00000555176 ADRA2BP18089 450 aa9.26□□□□□ -0.93
HNRNPC-217ENST00000555176 PLPPR3Q6T4P5 718 aa9.16□□□□□ -0.94
HNRNPC-217ENST00000555176 CACNB1Q02641 598 aaPredicted RBP8.95□□□□□ -0.98
HNRNPC-217ENST00000555176 DMRT2Q9Y5R5 561 aa8.77□□□□□ -1.01
HNRNPC-217ENST00000555176 MAPK8IP2Q13387 824 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-217ENST00000555176 SCAF1Q9H7N4 1312 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-217ENST00000555176 RNF39Q9H2S5 420 aa8.51□□□□□ -1.05
HNRNPC-217ENST00000555176 DCAF8L1A6NGE4 600 aa8.39□□□□□ -1.07
HNRNPC-217ENST00000555176 C1QBPQ07021 282 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-217ENST00000555176 POTEHQ6S545 545 aa8.32□□□□□ -1.08
HNRNPC-217ENST00000555176 HOXD11P31277 338 aaPredicted RBP8.24□□□□□ -1.09
HNRNPC-217ENST00000555176 DNAJC5BQ9UF47 199 aa8.13□□□□□ -1.11
HNRNPC-217ENST00000555176 RNF216Q9NWF9 866 aaPredicted RBP8.02□□□□□ -1.13
HNRNPC-217ENST00000555176 PPP4R3CPQ6ZMV5 832 aa7.94□□□□□ -1.14
HNRNPC-217ENST00000555176 CNKSR2Q8WXI2 1034 aa7.94□□□□□ -1.14
HNRNPC-217ENST00000555176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.82□□□□□ -1.167e-13■■□□□ 14
HNRNPC-217ENST00000555176 DSG3P32926 999 aa7.77□□□□□ -1.17
HNRNPC-217ENST00000555176 CAPN15O75808 1086 aa7.65□□□□□ -1.18
HNRNPC-217ENST00000555176 SPINK5Q9NQ38 1064 aaPredicted RBP7.63□□□□□ -1.19
HNRNPC-217ENST00000555176 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-217ENST00000555176 SP7Q8TDD2 431 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-217ENST00000555176 CHRDL2Q6WN34 429 aa7.49□□□□□ -1.21
HNRNPC-217ENST00000555176 NCBP3Q53F19 620 aaKnown RBP7.48□□□□□ -1.21
HNRNPC-217ENST00000555176 RBM42Q9BTD8 480 aaKnown RBP7.46□□□□□ -1.22
HNRNPC-217ENST00000555176 ABCB7O75027 752 aa7.39□□□□□ -1.23
HNRNPC-217ENST00000555176 ZNF219Q9P2Y4 722 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-217ENST00000555176 TRHP20396 242 aaPredicted RBP7.38□□□□□ -1.23
HNRNPC-217ENST00000555176 APLP2Q06481 763 aa7.36□□□□□ -1.23
HNRNPC-217ENST00000555176 NPM3O75607 178 aaKnown RBP7.34□□□□□ -1.23
HNRNPC-217ENST00000555176 DNAJC5Q9H3Z4 198 aa7.27□□□□□ -1.25
HNRNPC-217ENST00000555176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.22□□□□□ -1.25
HNRNPC-217ENST00000555176 HNRNPUL2Q1KMD3 747 aaKnown RBP7.22□□□□□ -1.25
HNRNPC-217ENST00000555176 HAX1O00165 279 aa7.21□□□□□ -1.26
HNRNPC-217ENST00000555176 PIP4P2Q8N4L2 257 aa7.18□□□□□ -1.26
HNRNPC-217ENST00000555176 SLC4A2P04920 1241 aa7.16□□□□□ -1.26
HNRNPC-217ENST00000555176 AKT1S1Q96B36 256 aa7.16□□□□□ -1.26
HNRNPC-217ENST00000555176 SAMD1Q6SPF0 538 aaPredicted RBP7.13□□□□□ -1.27
HNRNPC-217ENST00000555176 KCNA4P22459 653 aa7.08□□□□□ -1.28
HNRNPC-217ENST00000555176 FXR2P51116 673 aaKnown RBP eCLIP7.08□□□□□ -1.28
HNRNPC-217ENST00000555176 POLA2Q14181 598 aa7.08□□□□□ -1.28
HNRNPC-217ENST00000555176 EVX2Q03828 476 aa7.07□□□□□ -1.28
HNRNPC-217ENST00000555176 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
HNRNPC-217ENST00000555176 LHX8Q68G74 356 aa7.06□□□□□ -1.28
HNRNPC-217ENST00000555176 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
HNRNPC-217ENST00000555176 PITPNM1O00562 1244 aa6.97□□□□□ -1.29
HNRNPC-217ENST00000555176 ZBTB12Q9Y330 459 aaPredicted RBP6.92□□□□□ -1.3
HNRNPC-217ENST00000555176 GABBR2O75899 941 aa6.89□□□□□ -1.31
HNRNPC-217ENST00000555176 C19orf67A6NJJ6 358 aa6.86□□□□□ -1.31
HNRNPC-217ENST00000555176 SLC4A1APQ9BWU0 796 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-217ENST00000555176 OSCARQ8IYS5 282 aa6.84□□□□□ -1.31
HNRNPC-217ENST00000555176 MYCNP04198 464 aaPredicted RBP6.82□□□□□ -1.32
HNRNPC-217ENST00000555176 PRKAR2AP13861 404 aaKnown RBP6.8□□□□□ -1.32
HNRNPC-217ENST00000555176 EHMT2Q96KQ7 1210 aa6.78□□□□□ -1.32
HNRNPC-217ENST00000555176 ABCC9O60706 1549 aa6.75□□□□□ -1.33
HNRNPC-217ENST00000555176 POTEIP0CG38 1075 aa6.73□□□□□ -1.33
HNRNPC-217ENST00000555176 POTEMA6NI47 508 aa6.67□□□□□ -1.34
HNRNPC-217ENST00000555176 CLCN6P51797 869 aa6.67□□□□□ -1.34
HNRNPC-217ENST00000555176 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
HNRNPC-217ENST00000555176 PCDH10Q9P2E7 1040 aa6.67□□□□□ -1.34
HNRNPC-217ENST00000555176 ATF5Q9Y2D1 282 aaPredicted RBP6.67□□□□□ -1.34
HNRNPC-217ENST00000555176 CLEC11AQ9Y240 323 aa6.66□□□□□ -1.34
HNRNPC-217ENST00000555176 SPDYE2BA6NHP3 402 aa6.65□□□□□ -1.34
HNRNPC-217ENST00000555176 SPDYE6P0CI01 402 aa6.65□□□□□ -1.34
HNRNPC-217ENST00000555176 SPDYE2Q495Y8 402 aa6.65□□□□□ -1.34
HNRNPC-217ENST00000555176 POTEGQ6S5H5 508 aa6.62□□□□□ -1.35
HNRNPC-217ENST00000555176 OTUD5Q96G74 571 aa6.6□□□□□ -1.35
HNRNPC-217ENST00000555176 CSRNP3Q8WYN3 585 aa6.59□□□□□ -1.35
HNRNPC-217ENST00000555176 DCBLD2Q96PD2 775 aa6.59□□□□□ -1.35
HNRNPC-217ENST00000555176 CHADLQ6NUI6 762 aa6.57□□□□□ -1.36
HNRNPC-217ENST00000555176 FOXD4L1Q9NU39 408 aa6.56□□□□□ -1.36
HNRNPC-217ENST00000555176 CD44P16070 742 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-217ENST00000555176 TRIM41Q8WV44 630 aa6.55□□□□□ -1.36
HNRNPC-217ENST00000555176 POTEB2H3BUK9 544 aa6.5□□□□□ -1.37
HNRNPC-217ENST00000555176 PRR29P0C7W0 189 aa6.49□□□□□ -1.37
HNRNPC-217ENST00000555176 SSUH2Q9Y2M2 353 aa6.49□□□□□ -1.37
HNRNPC-217ENST00000555176 FBLN2P98095 1184 aa6.48□□□□□ -1.37
HNRNPC-217ENST00000555176 ZNF692Q9BU19 519 aaPredicted RBP6.46□□□□□ -1.38
HNRNPC-217ENST00000555176 FARP1Q9Y4F1 1045 aaPredicted RBP6.46□□□□□ -1.38
HNRNPC-217ENST00000555176 ZBTB22O15209 634 aa6.44□□□□□ -1.38
HNRNPC-217ENST00000555176 ZNF579Q8NAF0 562 aaKnown RBP6.44□□□□□ -1.38
HNRNPC-217ENST00000555176 ILDR1Q86SU0 546 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-217ENST00000555176 GALR2O43603 387 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-217ENST00000555176 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-217ENST00000555176 ATXN8OSP0DMR3 200 aa6.37□□□□□ -1.39
HNRNPC-217ENST00000555176 ZRANB1Q9UGI0 708 aa6.37□□□□□ -1.39
HNRNPC-217ENST00000555176 MKRN4PQ13434 485 aaPredicted RBP6.34□□□□□ -1.39
HNRNPC-217ENST00000555176 MAMSTRQ6ZN01 415 aa6.34□□□□□ -1.39
HNRNPC-217ENST00000555176 PABPN1Q86U42 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
HNRNPC-217ENST00000555176 FAM163AQ96GL9 167 aaPredicted RBP6.34□□□□□ -1.39
HNRNPC-217ENST00000555176 PELP1Q8IZL8 1130 aaKnown RBP6.31□□□□□ -1.4
HNRNPC-217ENST00000555176 POTEJP0CG39 1038 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms