RNA–Protein interactions for RNA: ENST00000563039.2

SPN-205, Transcript of sialophorin, humanhuman

TSL 5

Gene SPN, Length 1,853 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-205ENST00000563039 NISCHQ9Y2I1 1504 aa45.02■■■■■ 4.8
SPN-205ENST00000563039 CCDC180Q9P1Z9 1646 aa39.39■■■■□ 3.9
SPN-205ENST00000563039 ABCC9O60706 1549 aa37.82■■■■□ 3.64
SPN-205ENST00000563039 ZCCHC6Q5VYS8 1495 aaKnown RBP37.71■■■■□ 3.63
SPN-205ENST00000563039 DCAF8L2P0C7V8 631 aa37.41■■■■□ 3.58
SPN-205ENST00000563039 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
SPN-205ENST00000563039 MYO15BQ96JP2 1530 aa36.87■■■■□ 3.49
SPN-205ENST00000563039 NACADO15069 1562 aa36.82■■■■□ 3.48
SPN-205ENST00000563039 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
SPN-205ENST00000563039 SHROOM4Q9ULL8 1493 aa36.48■■■■□ 3.43
SPN-205ENST00000563039 SCRIBQ14160 1630 aa36.26■■■■□ 3.4
SPN-205ENST00000563039 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
SPN-205ENST00000563039 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
SPN-205ENST00000563039 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
SPN-205ENST00000563039 CECR2Q9BXF3 1484 aa35.11■■■■□ 3.21
SPN-205ENST00000563039 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
SPN-205ENST00000563039 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.16
SPN-205ENST00000563039 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
SPN-205ENST00000563039 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
SPN-205ENST00000563039 SMARCA4P51532 1647 aa34.7■■■■□ 3.14
SPN-205ENST00000563039 EIF4G1Q04637 1599 aaKnown RBP34.55■■■■□ 3.12
SPN-205ENST00000563039 WIZO95785 1651 aa34.5■■■■□ 3.11
SPN-205ENST00000563039 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
SPN-205ENST00000563039 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
SPN-205ENST00000563039 CC2D2AQ9P2K1 1620 aa34.18■■■■□ 3.06
SPN-205ENST00000563039 SMARCA2P51531 1590 aa34.16■■■■□ 3.06
SPN-205ENST00000563039 TOP2AP11388 1531 aaKnown RBP34.05■■■■□ 3.04
SPN-205ENST00000563039 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
SPN-205ENST00000563039 BAZ1BQ9UIG0 1483 aaKnown RBP34■■■■□ 3.03
SPN-205ENST00000563039 DNAJC5BQ9UF47 199 aa33.93■■■■□ 3.02
SPN-205ENST00000563039 HMGXB3Q12766 1538 aa33.9■■■■□ 3.02
SPN-205ENST00000563039 CCDC88BA6NC98 1476 aa33.77■■■■□ 3
SPN-205ENST00000563039 CFTRP13569 1480 aa33.15■■■□□ 2.9
SPN-205ENST00000563039 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.89
SPN-205ENST00000563039 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
SPN-205ENST00000563039 NESP48681 1621 aa33.09■■■□□ 2.89
SPN-205ENST00000563039 ABCC8Q09428 1581 aa32.92■■■□□ 2.86
SPN-205ENST00000563039 LAMC3Q9Y6N6 1575 aa32.91■■■□□ 2.86
SPN-205ENST00000563039 PRDM2Q13029 1718 aa32.89■■■□□ 2.86
SPN-205ENST00000563039 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
SPN-205ENST00000563039 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
SPN-205ENST00000563039 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.821e-6■□□□□ 9.9
SPN-205ENST00000563039 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
SPN-205ENST00000563039 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
SPN-205ENST00000563039 KIF21AQ7Z4S6 1674 aa32.63■■■□□ 2.81
SPN-205ENST00000563039 CEP164Q9UPV0 1460 aa32.58■■■□□ 2.81
SPN-205ENST00000563039 CUX1P39880 1505 aa32.57■■■□□ 2.8
SPN-205ENST00000563039 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
SPN-205ENST00000563039 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
SPN-205ENST00000563039 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
SPN-205ENST00000563039 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
SPN-205ENST00000563039 TOPBP1Q92547 1522 aa32.37■■■□□ 2.77
SPN-205ENST00000563039 DNMBPQ6XZF7 1577 aa32.35■■■□□ 2.77
SPN-205ENST00000563039 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
SPN-205ENST00000563039 FGD5Q6ZNL6 1462 aa32.26■■■□□ 2.75
SPN-205ENST00000563039 SOGA1O94964 1423 aa32.22■■■□□ 2.75
SPN-205ENST00000563039 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
SPN-205ENST00000563039 THOC2Q8NI27 1593 aaKnown RBP32.2■■■□□ 2.74
SPN-205ENST00000563039 POLA1P09884 1462 aaPredicted RBP32.19■■■□□ 2.74
SPN-205ENST00000563039 RUSC2Q8N2Y8 1516 aa32.17■■■□□ 2.74
SPN-205ENST00000563039 WDR62O43379 1518 aa32.16■■■□□ 2.74
SPN-205ENST00000563039 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
SPN-205ENST00000563039 CUX2O14529 1486 aa32.02■■■□□ 2.72
SPN-205ENST00000563039 TARBP1Q13395 1621 aaKnown RBP31.94■■■□□ 2.7
SPN-205ENST00000563039 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
SPN-205ENST00000563039 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.7
SPN-205ENST00000563039 WDR97A6NE52 1622 aa31.88■■■□□ 2.69
SPN-205ENST00000563039 KIF27Q86VH2 1401 aa31.88■■■□□ 2.69
SPN-205ENST00000563039 EEA1Q15075 1411 aa31.88■■■□□ 2.69
SPN-205ENST00000563039 CSRNP3Q8WYN3 585 aa31.87■■■□□ 2.69
SPN-205ENST00000563039 TDRD9Q8NDG6 1382 aaKnown RBP31.86■■■□□ 2.69
SPN-205ENST00000563039 EHMT2Q96KQ7 1210 aa31.82■■■□□ 2.69
SPN-205ENST00000563039 IFT140Q96RY7 1462 aa31.82■■■□□ 2.68
SPN-205ENST00000563039 ZNF608Q9ULD9 1512 aaPredicted RBP31.78■■■□□ 2.68
SPN-205ENST00000563039 IGF1RP08069 1367 aa31.74■■■□□ 2.67
SPN-205ENST00000563039 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.673e-7■■■■■ 36.6
SPN-205ENST00000563039 ABCA5Q8WWZ7 1642 aa31.72■■■□□ 2.67
SPN-205ENST00000563039 GAPVD1Q14C86 1478 aa31.69■■■□□ 2.66
SPN-205ENST00000563039 PRXQ9BXM0 1461 aa31.6■■■□□ 2.65
SPN-205ENST00000563039 EIF4G3O43432 1585 aaKnown RBP31.58■■■□□ 2.65
SPN-205ENST00000563039 RAPGEF2Q9Y4G8 1499 aa31.56■■■□□ 2.64
SPN-205ENST00000563039 KIF21BO75037 1637 aa31.55■■■□□ 2.64
SPN-205ENST00000563039 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
SPN-205ENST00000563039 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
SPN-205ENST00000563039 ERICH3Q5RHP9 1530 aa31.52■■■□□ 2.64
SPN-205ENST00000563039 GRIN2BQ13224 1484 aa31.49■■■□□ 2.63
SPN-205ENST00000563039 GOLGA3Q08378 1498 aa31.47■■■□□ 2.63
SPN-205ENST00000563039 UBTFP17480 764 aaKnown RBP31.42■■■□□ 2.62
SPN-205ENST00000563039 CUL7Q14999 1698 aa31.41■■■□□ 2.62
SPN-205ENST00000563039 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
SPN-205ENST00000563039 ADAMTS12P58397 1594 aa31.34■■■□□ 2.61
SPN-205ENST00000563039 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.6
SPN-205ENST00000563039 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
SPN-205ENST00000563039 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
SPN-205ENST00000563039 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
SPN-205ENST00000563039 FBLN2P98095 1184 aa31.16■■■□□ 2.58
SPN-205ENST00000563039 RANGAP1P46060 587 aaPredicted RBP31.14■■■□□ 2.58
SPN-205ENST00000563039 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
SPN-205ENST00000563039 CEP162Q5TB80 1403 aa31.13■■■□□ 2.57
SPN-205ENST00000563039 GRIN2AQ12879 1464 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms