RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 NISCHQ9Y2I1 1504 aa42.14■■■■■ 4.34
NME1-210ENST00000512768 CCDC180Q9P1Z9 1646 aa37.11■■■■□ 3.53
NME1-210ENST00000512768 ABCC9O60706 1549 aa35.66■■■■□ 3.3
NME1-210ENST00000512768 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
NME1-210ENST00000512768 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
NME1-210ENST00000512768 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
NME1-210ENST00000512768 NACADO15069 1562 aa34.72■■■■□ 3.15
NME1-210ENST00000512768 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
NME1-210ENST00000512768 RB1CC1Q8TDY2 1594 aa34.58■■■■□ 3.13
NME1-210ENST00000512768 SCRIBQ14160 1630 aa33.99■■■■□ 3.03
NME1-210ENST00000512768 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
NME1-210ENST00000512768 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
NME1-210ENST00000512768 BICRAQ9NZM4 1560 aa33.52■■■□□ 2.96
NME1-210ENST00000512768 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
NME1-210ENST00000512768 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.84
NME1-210ENST00000512768 BAZ1AQ9NRL2 1556 aaPredicted RBP32.6■■■□□ 2.81
NME1-210ENST00000512768 EIF4G1Q04637 1599 aaKnown RBP32.58■■■□□ 2.81
NME1-210ENST00000512768 SMARCA4P51532 1647 aa32.55■■■□□ 2.8
NME1-210ENST00000512768 MROH2BQ7Z745 1585 aa32.51■■■□□ 2.79
NME1-210ENST00000512768 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
NME1-210ENST00000512768 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
NME1-210ENST00000512768 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
NME1-210ENST00000512768 WIZO95785 1651 aa32.21■■■□□ 2.75
NME1-210ENST00000512768 ATAD2BQ9ULI0 1458 aa32.17■■■□□ 2.74
NME1-210ENST00000512768 PEG3Q9GZU2 1588 aa32.17■■■□□ 2.74
NME1-210ENST00000512768 SMARCA2P51531 1590 aa32.16■■■□□ 2.74
NME1-210ENST00000512768 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
NME1-210ENST00000512768 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
NME1-210ENST00000512768 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
NME1-210ENST00000512768 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
NME1-210ENST00000512768 TOP2AP11388 1531 aaKnown RBP31.89■■■□□ 2.7
NME1-210ENST00000512768 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
NME1-210ENST00000512768 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
NME1-210ENST00000512768 CFTRP13569 1480 aa31.11■■■□□ 2.57
NME1-210ENST00000512768 NESP48681 1621 aa31.08■■■□□ 2.57
NME1-210ENST00000512768 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
NME1-210ENST00000512768 PRDM2Q13029 1718 aa30.95■■■□□ 2.55
NME1-210ENST00000512768 PDS5BQ9NTI5 1447 aa30.84■■■□□ 2.53
NME1-210ENST00000512768 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
NME1-210ENST00000512768 KIF21AQ7Z4S6 1674 aa30.73■■■□□ 2.51
NME1-210ENST00000512768 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.5
NME1-210ENST00000512768 ERCC6Q03468 1493 aa30.67■■■□□ 2.5
NME1-210ENST00000512768 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
NME1-210ENST00000512768 WRNQ14191 1432 aaPredicted RBP eCLIP30.53■■■□□ 2.48
NME1-210ENST00000512768 MRC2Q9UBG0 1479 aa30.49■■■□□ 2.47
NME1-210ENST00000512768 CHIC1Q5VXU3 224 aa30.47■■■□□ 2.47
NME1-210ENST00000512768 CUX1P39880 1505 aa30.46■■■□□ 2.47
NME1-210ENST00000512768 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
NME1-210ENST00000512768 SYNJ1O43426 1573 aa30.42■■■□□ 2.46
NME1-210ENST00000512768 DNMBPQ6XZF7 1577 aa30.42■■■□□ 2.46
NME1-210ENST00000512768 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
NME1-210ENST00000512768 TOPBP1Q92547 1522 aa30.39■■■□□ 2.46
NME1-210ENST00000512768 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
NME1-210ENST00000512768 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
NME1-210ENST00000512768 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
NME1-210ENST00000512768 WDR62O43379 1518 aa30.35■■■□□ 2.45
NME1-210ENST00000512768 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
NME1-210ENST00000512768 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
NME1-210ENST00000512768 CUX2O14529 1486 aa30.08■■■□□ 2.41
NME1-210ENST00000512768 SOGA1O94964 1423 aa30.08■■■□□ 2.41
NME1-210ENST00000512768 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
NME1-210ENST00000512768 IFT140Q96RY7 1462 aa30.01■■■□□ 2.4
NME1-210ENST00000512768 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
NME1-210ENST00000512768 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.38
NME1-210ENST00000512768 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
NME1-210ENST00000512768 TDRD9Q8NDG6 1382 aaKnown RBP29.84■■■□□ 2.37
NME1-210ENST00000512768 ZNF608Q9ULD9 1512 aaPredicted RBP29.83■■■□□ 2.37
NME1-210ENST00000512768 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
NME1-210ENST00000512768 RUSC2Q8N2Y8 1516 aa29.82■■■□□ 2.36
NME1-210ENST00000512768 ABCA5Q8WWZ7 1642 aa29.78■■■□□ 2.36
NME1-210ENST00000512768 AQRO60306 1485 aaKnown RBP eCLIP29.77■■■□□ 2.368e-7■■■□□ 18.5
NME1-210ENST00000512768 FAM9AQ8IZU1 332 aaPredicted RBP29.76■■■□□ 2.35
NME1-210ENST00000512768 GAPVD1Q14C86 1478 aa29.75■■■□□ 2.35
NME1-210ENST00000512768 EEA1Q15075 1411 aa29.74■■■□□ 2.35
NME1-210ENST00000512768 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
NME1-210ENST00000512768 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
NME1-210ENST00000512768 GRIN2BQ13224 1484 aa29.63■■■□□ 2.33
NME1-210ENST00000512768 CSRNP3Q8WYN3 585 aa29.62■■■□□ 2.33
NME1-210ENST00000512768 IGF1RP08069 1367 aa29.62■■■□□ 2.33
NME1-210ENST00000512768 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
NME1-210ENST00000512768 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
NME1-210ENST00000512768 CUL7Q14999 1698 aa29.49■■■□□ 2.31
NME1-210ENST00000512768 CARMIL1Q5VZK9 1371 aa29.47■■■□□ 2.31
NME1-210ENST00000512768 MAGI1Q96QZ7 1491 aaPredicted RBP29.47■■■□□ 2.31
NME1-210ENST00000512768 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
NME1-210ENST00000512768 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
NME1-210ENST00000512768 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
NME1-210ENST00000512768 KIF21BO75037 1637 aa29.39■■■□□ 2.3
NME1-210ENST00000512768 RAPGEF2Q9Y4G8 1499 aa29.36■■■□□ 2.29
NME1-210ENST00000512768 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
NME1-210ENST00000512768 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
NME1-210ENST00000512768 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
NME1-210ENST00000512768 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
NME1-210ENST00000512768 FBLN2P98095 1184 aa29.29■■■□□ 2.28
NME1-210ENST00000512768 LOC105371045A0A1W2PR82 267 aa29.26■■■□□ 2.27
NME1-210ENST00000512768 GRIN2AQ12879 1464 aa29.25■■■□□ 2.27
NME1-210ENST00000512768 CHD1O14646 1710 aa29.24■■■□□ 2.27
NME1-210ENST00000512768 UBTFP17480 764 aaKnown RBP29.18■■■□□ 2.26
NME1-210ENST00000512768 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
NME1-210ENST00000512768 NUP160Q12769 1436 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms