RNA–Protein interactions for RNA: ENST00000314282.7

MRPL48-202, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-202ENST00000314282 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
MRPL48-202ENST00000314282 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
MRPL48-202ENST00000314282 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
MRPL48-202ENST00000314282 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
MRPL48-202ENST00000314282 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
MRPL48-202ENST00000314282 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
MRPL48-202ENST00000314282 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
MRPL48-202ENST00000314282 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
MRPL48-202ENST00000314282 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
MRPL48-202ENST00000314282 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
MRPL48-202ENST00000314282 ABCC9O60706 1549 aa18.04■□□□□ 0.48
MRPL48-202ENST00000314282 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
MRPL48-202ENST00000314282 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
MRPL48-202ENST00000314282 KCNA4P22459 653 aa17.73■□□□□ 0.43
MRPL48-202ENST00000314282 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
MRPL48-202ENST00000314282 NACADO15069 1562 aa17.65■□□□□ 0.42
MRPL48-202ENST00000314282 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
MRPL48-202ENST00000314282 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.4
MRPL48-202ENST00000314282 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
MRPL48-202ENST00000314282 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
MRPL48-202ENST00000314282 RTN4Q9NQC3 1192 aaKnown RBP17.24■□□□□ 0.35
MRPL48-202ENST00000314282 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
MRPL48-202ENST00000314282 ADRA2BP18089 450 aa17.1■□□□□ 0.33
MRPL48-202ENST00000314282 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.33
MRPL48-202ENST00000314282 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.33
MRPL48-202ENST00000314282 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
MRPL48-202ENST00000314282 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
MRPL48-202ENST00000314282 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
MRPL48-202ENST00000314282 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
MRPL48-202ENST00000314282 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
MRPL48-202ENST00000314282 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
MRPL48-202ENST00000314282 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
MRPL48-202ENST00000314282 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
MRPL48-202ENST00000314282 WIZO95785 1651 aa16.7■□□□□ 0.26
MRPL48-202ENST00000314282 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
MRPL48-202ENST00000314282 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
MRPL48-202ENST00000314282 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
MRPL48-202ENST00000314282 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
MRPL48-202ENST00000314282 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
MRPL48-202ENST00000314282 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
MRPL48-202ENST00000314282 ZBTB22O15209 634 aa16.41■□□□□ 0.22
MRPL48-202ENST00000314282 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
MRPL48-202ENST00000314282 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
MRPL48-202ENST00000314282 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
MRPL48-202ENST00000314282 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
MRPL48-202ENST00000314282 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
MRPL48-202ENST00000314282 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
MRPL48-202ENST00000314282 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
MRPL48-202ENST00000314282 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
MRPL48-202ENST00000314282 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
MRPL48-202ENST00000314282 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
MRPL48-202ENST00000314282 PRKCSHP14314 528 aaPredicted RBP15.98■□□□□ 0.15
MRPL48-202ENST00000314282 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
MRPL48-202ENST00000314282 CFTRP13569 1480 aa15.95■□□□□ 0.14
MRPL48-202ENST00000314282 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
MRPL48-202ENST00000314282 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
MRPL48-202ENST00000314282 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
MRPL48-202ENST00000314282 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
MRPL48-202ENST00000314282 NESP48681 1621 aa15.82■□□□□ 0.12
MRPL48-202ENST00000314282 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
MRPL48-202ENST00000314282 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
MRPL48-202ENST00000314282 SOGA1O94964 1423 aa15.75■□□□□ 0.11
MRPL48-202ENST00000314282 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
MRPL48-202ENST00000314282 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
MRPL48-202ENST00000314282 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
MRPL48-202ENST00000314282 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
MRPL48-202ENST00000314282 FKBP8Q14318 412 aa15.74■□□□□ 0.11
MRPL48-202ENST00000314282 CUX1P39880 1505 aa15.73■□□□□ 0.11
MRPL48-202ENST00000314282 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
MRPL48-202ENST00000314282 FOXD1Q16676 465 aa15.71■□□□□ 0.11
MRPL48-202ENST00000314282 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
MRPL48-202ENST00000314282 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
MRPL48-202ENST00000314282 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
MRPL48-202ENST00000314282 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
MRPL48-202ENST00000314282 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
MRPL48-202ENST00000314282 BCANQ96GW7 911 aa15.66■□□□□ 0.1
MRPL48-202ENST00000314282 EEA1Q15075 1411 aa15.65■□□□□ 0.1
MRPL48-202ENST00000314282 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
MRPL48-202ENST00000314282 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
MRPL48-202ENST00000314282 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
MRPL48-202ENST00000314282 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
MRPL48-202ENST00000314282 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
MRPL48-202ENST00000314282 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
MRPL48-202ENST00000314282 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
MRPL48-202ENST00000314282 KIF27Q86VH2 1401 aa15.52■□□□□ 0.08
MRPL48-202ENST00000314282 CUX2O14529 1486 aa15.49■□□□□ 0.07
MRPL48-202ENST00000314282 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
MRPL48-202ENST00000314282 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
MRPL48-202ENST00000314282 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
MRPL48-202ENST00000314282 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
MRPL48-202ENST00000314282 GOLGA3Q08378 1498 aa15.45■□□□□ 0.06
MRPL48-202ENST00000314282 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
MRPL48-202ENST00000314282 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
MRPL48-202ENST00000314282 TPRNQ4KMQ1 711 aa15.43■□□□□ 0.06
MRPL48-202ENST00000314282 KIF21BO75037 1637 aa15.42■□□□□ 0.06
MRPL48-202ENST00000314282 IGF1RP08069 1367 aa15.41■□□□□ 0.06
MRPL48-202ENST00000314282 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
MRPL48-202ENST00000314282 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
MRPL48-202ENST00000314282 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
MRPL48-202ENST00000314282 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms