RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
TCF3-214ENST00000590605 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
TCF3-214ENST00000590605 ABCC9O60706 1549 aa32.24■■■□□ 2.75
TCF3-214ENST00000590605 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.56
TCF3-214ENST00000590605 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
TCF3-214ENST00000590605 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
TCF3-214ENST00000590605 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
TCF3-214ENST00000590605 DCAF8L2P0C7V8 631 aa30.72■■■□□ 2.51
TCF3-214ENST00000590605 NACADO15069 1562 aa30.66■■■□□ 2.5
TCF3-214ENST00000590605 UNC13AQ9UPW8 1703 aa30.11■■■□□ 2.41
TCF3-214ENST00000590605 DNAJC5BQ9UF47 199 aa30.09■■■□□ 2.41
TCF3-214ENST00000590605 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.392e-6■□□□□ 9.6
TCF3-214ENST00000590605 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
TCF3-214ENST00000590605 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
TCF3-214ENST00000590605 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
TCF3-214ENST00000590605 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
TCF3-214ENST00000590605 EIF4G1Q04637 1599 aaKnown RBP29.1■■■□□ 2.25
TCF3-214ENST00000590605 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
TCF3-214ENST00000590605 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
TCF3-214ENST00000590605 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
TCF3-214ENST00000590605 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
TCF3-214ENST00000590605 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
TCF3-214ENST00000590605 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
TCF3-214ENST00000590605 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
TCF3-214ENST00000590605 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
TCF3-214ENST00000590605 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
TCF3-214ENST00000590605 WIZO95785 1651 aa28.2■■■□□ 2.11
TCF3-214ENST00000590605 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
TCF3-214ENST00000590605 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
TCF3-214ENST00000590605 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
TCF3-214ENST00000590605 TOP2AP11388 1531 aaKnown RBP28.03■■■□□ 2.08
TCF3-214ENST00000590605 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
TCF3-214ENST00000590605 CUX2O14529 1486 aa27.76■■■□□ 2.04
TCF3-214ENST00000590605 NESP48681 1621 aa27.71■■■□□ 2.03
TCF3-214ENST00000590605 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.03
TCF3-214ENST00000590605 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
TCF3-214ENST00000590605 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
TCF3-214ENST00000590605 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
TCF3-214ENST00000590605 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
TCF3-214ENST00000590605 CFTRP13569 1480 aa27.45■■□□□ 1.99
TCF3-214ENST00000590605 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
TCF3-214ENST00000590605 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
TCF3-214ENST00000590605 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
TCF3-214ENST00000590605 MRC2Q9UBG0 1479 aa27.14■■□□□ 1.94
TCF3-214ENST00000590605 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
TCF3-214ENST00000590605 WDR62O43379 1518 aa27.09■■□□□ 1.93
TCF3-214ENST00000590605 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
TCF3-214ENST00000590605 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
TCF3-214ENST00000590605 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
TCF3-214ENST00000590605 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
TCF3-214ENST00000590605 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
TCF3-214ENST00000590605 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
TCF3-214ENST00000590605 CUX1P39880 1505 aa26.74■■□□□ 1.87
TCF3-214ENST00000590605 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
TCF3-214ENST00000590605 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
TCF3-214ENST00000590605 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
TCF3-214ENST00000590605 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
TCF3-214ENST00000590605 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
TCF3-214ENST00000590605 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
TCF3-214ENST00000590605 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
TCF3-214ENST00000590605 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
TCF3-214ENST00000590605 SOGA1O94964 1423 aa26.51■■□□□ 1.83
TCF3-214ENST00000590605 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
TCF3-214ENST00000590605 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
TCF3-214ENST00000590605 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
TCF3-214ENST00000590605 RAD54L2Q9Y4B4 1467 aa26.4■■□□□ 1.82
TCF3-214ENST00000590605 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
TCF3-214ENST00000590605 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
TCF3-214ENST00000590605 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
TCF3-214ENST00000590605 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
TCF3-214ENST00000590605 EEA1Q15075 1411 aa26.24■■□□□ 1.79
TCF3-214ENST00000590605 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
TCF3-214ENST00000590605 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.791e-6■■■■□ 23.5
TCF3-214ENST00000590605 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
TCF3-214ENST00000590605 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
TCF3-214ENST00000590605 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
TCF3-214ENST00000590605 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
TCF3-214ENST00000590605 CHD1O14646 1710 aa26.17■■□□□ 1.78
TCF3-214ENST00000590605 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
TCF3-214ENST00000590605 GRIN2BQ13224 1484 aa26.14■■□□□ 1.78
TCF3-214ENST00000590605 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
TCF3-214ENST00000590605 IGF1RP08069 1367 aa26.09■■□□□ 1.77
TCF3-214ENST00000590605 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
TCF3-214ENST00000590605 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
TCF3-214ENST00000590605 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
TCF3-214ENST00000590605 FBLN2P98095 1184 aa26.03■■□□□ 1.76
TCF3-214ENST00000590605 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
TCF3-214ENST00000590605 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
TCF3-214ENST00000590605 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
TCF3-214ENST00000590605 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
TCF3-214ENST00000590605 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
TCF3-214ENST00000590605 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.75
TCF3-214ENST00000590605 CUL7Q14999 1698 aa25.94■■□□□ 1.74
TCF3-214ENST00000590605 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
TCF3-214ENST00000590605 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
TCF3-214ENST00000590605 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
TCF3-214ENST00000590605 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
TCF3-214ENST00000590605 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
TCF3-214ENST00000590605 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
TCF3-214ENST00000590605 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms