RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 DCAF8L2P0C7V8 631 aa31.96■■■□□ 2.71
ATG9A-215ENST00000446716 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
ATG9A-215ENST00000446716 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
ATG9A-215ENST00000446716 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.3
ATG9A-215ENST00000446716 EHMT2Q96KQ7 1210 aa28.81■■■□□ 2.2
ATG9A-215ENST00000446716 APLP2Q06481 763 aa28.34■■■□□ 2.13
ATG9A-215ENST00000446716 FAM9AQ8IZU1 332 aaPredicted RBP28.25■■■□□ 2.11
ATG9A-215ENST00000446716 RANGAP1P46060 587 aaPredicted RBP27.77■■■□□ 2.04
ATG9A-215ENST00000446716 TTBK1Q5TCY1 1321 aaPredicted RBP27.74■■■□□ 2.03
ATG9A-215ENST00000446716 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
ATG9A-215ENST00000446716 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
ATG9A-215ENST00000446716 UBTFP17480 764 aaKnown RBP27.4■■□□□ 1.98
ATG9A-215ENST00000446716 PCGF6Q9BYE7 350 aa27.23■■□□□ 1.95
ATG9A-215ENST00000446716 PELP1Q8IZL8 1130 aaKnown RBP27.2■■□□□ 1.95
ATG9A-215ENST00000446716 CCER1Q8TC90 406 aaPredicted RBP26.92■■□□□ 1.9
ATG9A-215ENST00000446716 ABCC9O60706 1549 aa26.82■■□□□ 1.88
ATG9A-215ENST00000446716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
ATG9A-215ENST00000446716 HNRNPUL2Q1KMD3 747 aaKnown RBP26.79■■□□□ 1.88
ATG9A-215ENST00000446716 MYT1LQ9UL68 1186 aa26.73■■□□□ 1.87
ATG9A-215ENST00000446716 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.868e-7■■■□□ 15.3
ATG9A-215ENST00000446716 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
ATG9A-215ENST00000446716 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
ATG9A-215ENST00000446716 ITGAEP38570 1179 aa26.44■■□□□ 1.82
ATG9A-215ENST00000446716 CENPBP07199 599 aaPredicted RBP26.38■■□□□ 1.81
ATG9A-215ENST00000446716 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
ATG9A-215ENST00000446716 LOC105371045A0A1W2PR82 267 aa26.19■■□□□ 1.78
ATG9A-215ENST00000446716 TRIM26Q12899 539 aaPredicted RBP26.14■■□□□ 1.78
ATG9A-215ENST00000446716 POLR3GLQ9BT43 218 aa26.11■■□□□ 1.77
ATG9A-215ENST00000446716 NEFLP07196 543 aa26.07■■□□□ 1.76
ATG9A-215ENST00000446716 FBLN2P98095 1184 aa26.01■■□□□ 1.76
ATG9A-215ENST00000446716 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
ATG9A-215ENST00000446716 ERICH6Q7L0X2 663 aa26■■□□□ 1.75
ATG9A-215ENST00000446716 FAM50AQ14320 339 aaKnown RBP25.83■■□□□ 1.73
ATG9A-215ENST00000446716 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
ATG9A-215ENST00000446716 CNGB1Q14028 1251 aaPredicted RBP25.78■■□□□ 1.72
ATG9A-215ENST00000446716 TRIM52Q96A61 297 aa25.7■■□□□ 1.7
ATG9A-215ENST00000446716 HRCP23327 699 aa25.53■■□□□ 1.68
ATG9A-215ENST00000446716 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
ATG9A-215ENST00000446716 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
ATG9A-215ENST00000446716 P3H3Q8IVL6 736 aa25.48■■□□□ 1.67
ATG9A-215ENST00000446716 NEUROD1Q13562 356 aa25.39■■□□□ 1.66
ATG9A-215ENST00000446716 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
ATG9A-215ENST00000446716 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
ATG9A-215ENST00000446716 CDK11AQ9UQ88 783 aaPredicted RBP25.27■■□□□ 1.64
ATG9A-215ENST00000446716 DAXXQ9UER7 740 aaPredicted RBP25.26■■□□□ 1.63
ATG9A-215ENST00000446716 ZNF777Q9ULD5 760 aaPredicted RBP25.26■■□□□ 1.63
ATG9A-215ENST00000446716 BCANQ96GW7 911 aa25.25■■□□□ 1.63
ATG9A-215ENST00000446716 NPM1P06748 294 aaKnown RBP eCLIP25.2■■□□□ 1.62
ATG9A-215ENST00000446716 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
ATG9A-215ENST00000446716 ZCCHC6Q5VYS8 1495 aaKnown RBP25.14■■□□□ 1.61
ATG9A-215ENST00000446716 DIEXFQ68CQ4 756 aaKnown RBP25.03■■□□□ 1.6
ATG9A-215ENST00000446716 CLSPNQ9HAW4 1339 aa25■■□□□ 1.59
ATG9A-215ENST00000446716 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
ATG9A-215ENST00000446716 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
ATG9A-215ENST00000446716 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
ATG9A-215ENST00000446716 STAG3Q9UJ98 1225 aa24.91■■□□□ 1.58
ATG9A-215ENST00000446716 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
ATG9A-215ENST00000446716 ANP32CO43423 234 aa24.89■■□□□ 1.58
ATG9A-215ENST00000446716 SLC24A1O60721 1099 aa24.89■■□□□ 1.58
ATG9A-215ENST00000446716 CHGAP10645 457 aaKnown RBP24.88■■□□□ 1.57
ATG9A-215ENST00000446716 NEFMP07197 916 aa24.84■■□□□ 1.57
ATG9A-215ENST00000446716 MYT1Q01538 1121 aa24.81■■□□□ 1.56
ATG9A-215ENST00000446716 ZBTB47Q9UFB7 747 aaPredicted RBP24.74■■□□□ 1.55
ATG9A-215ENST00000446716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.547e-7■■□□□ 14.1
ATG9A-215ENST00000446716 TSPY4P0CV99 314 aa24.66■■□□□ 1.54
ATG9A-215ENST00000446716 TSPY10P0CW01 314 aa24.66■■□□□ 1.54
ATG9A-215ENST00000446716 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
ATG9A-215ENST00000446716 CHIC2Q9UKJ5 165 aa24.65■■□□□ 1.54
ATG9A-215ENST00000446716 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
ATG9A-215ENST00000446716 TONSLQ96HA7 1378 aa24.58■■□□□ 1.53
ATG9A-215ENST00000446716 MTUS2Q5JR59 1369 aa24.58■■□□□ 1.52
ATG9A-215ENST00000446716 NACADO15069 1562 aa24.56■■□□□ 1.52
ATG9A-215ENST00000446716 BCL11AQ9H165 835 aa24.55■■□□□ 1.52
ATG9A-215ENST00000446716 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
ATG9A-215ENST00000446716 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
ATG9A-215ENST00000446716 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
ATG9A-215ENST00000446716 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
ATG9A-215ENST00000446716 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
ATG9A-215ENST00000446716 RTL5Q5HYW3 569 aaPredicted RBP24.38■■□□□ 1.49
ATG9A-215ENST00000446716 CLIP1P30622 1438 aa24.37■■□□□ 1.49
ATG9A-215ENST00000446716 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
ATG9A-215ENST00000446716 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
ATG9A-215ENST00000446716 PPP1R15AO75807 674 aaPredicted RBP24.27■■□□□ 1.48
ATG9A-215ENST00000446716 ARID4BQ4LE39 1312 aaPredicted RBP24.27■■□□□ 1.48
ATG9A-215ENST00000446716 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
ATG9A-215ENST00000446716 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
ATG9A-215ENST00000446716 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
ATG9A-215ENST00000446716 EEA1Q15075 1411 aa24.24■■□□□ 1.47
ATG9A-215ENST00000446716 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
ATG9A-215ENST00000446716 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
ATG9A-215ENST00000446716 DDX10Q13206 875 aaKnown RBP24.18■■□□□ 1.46
ATG9A-215ENST00000446716 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
ATG9A-215ENST00000446716 GOLGA3Q08378 1498 aa24.16■■□□□ 1.46
ATG9A-215ENST00000446716 GTF3C3Q9Y5Q9 886 aa24.13■■□□□ 1.45
ATG9A-215ENST00000446716 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
ATG9A-215ENST00000446716 FAM9BQ8IZU0 186 aa24.12■■□□□ 1.45
ATG9A-215ENST00000446716 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
ATG9A-215ENST00000446716 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
ATG9A-215ENST00000446716 SALL2Q9Y467 1007 aaPredicted RBP24.09■■□□□ 1.45
ATG9A-215ENST00000446716 PLEKHG5O94827 1062 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms