RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
MRPL48-211ENST00000543058 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
MRPL48-211ENST00000543058 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
MRPL48-211ENST00000543058 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
MRPL48-211ENST00000543058 FOXD1Q16676 465 aa16■□□□□ 0.15
MRPL48-211ENST00000543058 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
MRPL48-211ENST00000543058 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
MRPL48-211ENST00000543058 MSH5O43196 834 aa14.95□□□□□ -0.02
MRPL48-211ENST00000543058 ADRA2BP18089 450 aa14.95□□□□□ -0.02
MRPL48-211ENST00000543058 PIAS4Q8N2W9 510 aaPredicted RBP14.92□□□□□ -0.02
MRPL48-211ENST00000543058 POTEDQ86YR6 584 aa14.36□□□□□ -0.11
MRPL48-211ENST00000543058 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
MRPL48-211ENST00000543058 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
MRPL48-211ENST00000543058 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
MRPL48-211ENST00000543058 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
MRPL48-211ENST00000543058 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
MRPL48-211ENST00000543058 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
MRPL48-211ENST00000543058 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
MRPL48-211ENST00000543058 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
MRPL48-211ENST00000543058 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
MRPL48-211ENST00000543058 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
MRPL48-211ENST00000543058 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
MRPL48-211ENST00000543058 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
MRPL48-211ENST00000543058 KCNA4P22459 653 aa12.7□□□□□ -0.38
MRPL48-211ENST00000543058 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
MRPL48-211ENST00000543058 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
MRPL48-211ENST00000543058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
MRPL48-211ENST00000543058 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
MRPL48-211ENST00000543058 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
MRPL48-211ENST00000543058 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
MRPL48-211ENST00000543058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
MRPL48-211ENST00000543058 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
MRPL48-211ENST00000543058 DSG3P32926 999 aa11.99□□□□□ -0.49
MRPL48-211ENST00000543058 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
MRPL48-211ENST00000543058 APLP2Q06481 763 aa11.98□□□□□ -0.49
MRPL48-211ENST00000543058 CAPN15O75808 1086 aa11.97□□□□□ -0.49
MRPL48-211ENST00000543058 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
MRPL48-211ENST00000543058 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
MRPL48-211ENST00000543058 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
MRPL48-211ENST00000543058 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
MRPL48-211ENST00000543058 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
MRPL48-211ENST00000543058 ZBTB22O15209 634 aa11.72□□□□□ -0.53
MRPL48-211ENST00000543058 ABCB7O75027 752 aa11.69□□□□□ -0.54
MRPL48-211ENST00000543058 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
MRPL48-211ENST00000543058 POLA2Q14181 598 aa11.56□□□□□ -0.56
MRPL48-211ENST00000543058 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
MRPL48-211ENST00000543058 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
MRPL48-211ENST00000543058 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
MRPL48-211ENST00000543058 POTEHQ6S545 545 aa11.27□□□□□ -0.61
MRPL48-211ENST00000543058 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
MRPL48-211ENST00000543058 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
MRPL48-211ENST00000543058 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
MRPL48-211ENST00000543058 FBLN2P98095 1184 aa11.11□□□□□ -0.63
MRPL48-211ENST00000543058 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
MRPL48-211ENST00000543058 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
MRPL48-211ENST00000543058 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
MRPL48-211ENST00000543058 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
MRPL48-211ENST00000543058 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
MRPL48-211ENST00000543058 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
MRPL48-211ENST00000543058 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
MRPL48-211ENST00000543058 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
MRPL48-211ENST00000543058 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
MRPL48-211ENST00000543058 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
MRPL48-211ENST00000543058 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
MRPL48-211ENST00000543058 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
MRPL48-211ENST00000543058 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
MRPL48-211ENST00000543058 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
MRPL48-211ENST00000543058 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
MRPL48-211ENST00000543058 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
MRPL48-211ENST00000543058 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
MRPL48-211ENST00000543058 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
MRPL48-211ENST00000543058 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
MRPL48-211ENST00000543058 HAX1O00165 279 aa10.56□□□□□ -0.72
MRPL48-211ENST00000543058 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
MRPL48-211ENST00000543058 PROM2Q8N271 834 aa10.51□□□□□ -0.73
MRPL48-211ENST00000543058 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
MRPL48-211ENST00000543058 EVX2Q03828 476 aa10.5□□□□□ -0.73
MRPL48-211ENST00000543058 CHADLQ6NUI6 762 aa10.49□□□□□ -0.73
MRPL48-211ENST00000543058 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
MRPL48-211ENST00000543058 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
MRPL48-211ENST00000543058 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
MRPL48-211ENST00000543058 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
MRPL48-211ENST00000543058 GABBR2O75899 941 aa10.28□□□□□ -0.76
MRPL48-211ENST00000543058 CLCN6P51797 869 aa10.27□□□□□ -0.77
MRPL48-211ENST00000543058 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
MRPL48-211ENST00000543058 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
MRPL48-211ENST00000543058 ZRANB1Q9UGI0 708 aa10.15□□□□□ -0.78
MRPL48-211ENST00000543058 FKBP8Q14318 412 aa10.13□□□□□ -0.79
MRPL48-211ENST00000543058 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
MRPL48-211ENST00000543058 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
MRPL48-211ENST00000543058 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
MRPL48-211ENST00000543058 MIER1Q8N108 512 aa10.03□□□□□ -0.8
MRPL48-211ENST00000543058 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
MRPL48-211ENST00000543058 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
MRPL48-211ENST00000543058 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
MRPL48-211ENST00000543058 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
MRPL48-211ENST00000543058 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
MRPL48-211ENST00000543058 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
MRPL48-211ENST00000543058 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
MRPL48-211ENST00000543058 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms