RNA–Protein interactions for RNA: ENST00000630370.2

DDX3X-220, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-220ENST00000630370 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
DDX3X-220ENST00000630370 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
DDX3X-220ENST00000630370 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
DDX3X-220ENST00000630370 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
DDX3X-220ENST00000630370 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
DDX3X-220ENST00000630370 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
DDX3X-220ENST00000630370 ABCC9O60706 1549 aa17.02■□□□□ 0.31
DDX3X-220ENST00000630370 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
DDX3X-220ENST00000630370 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
DDX3X-220ENST00000630370 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.223e-7■■□□□ 14.4
DDX3X-220ENST00000630370 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
DDX3X-220ENST00000630370 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
DDX3X-220ENST00000630370 CECR2Q9BXF3 1484 aa16.24■□□□□ 0.19
DDX3X-220ENST00000630370 FAM9AQ8IZU1 332 aaPredicted RBP16.22■□□□□ 0.19
DDX3X-220ENST00000630370 NACADO15069 1562 aa16.19■□□□□ 0.18
DDX3X-220ENST00000630370 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
DDX3X-220ENST00000630370 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
DDX3X-220ENST00000630370 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
DDX3X-220ENST00000630370 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
DDX3X-220ENST00000630370 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
DDX3X-220ENST00000630370 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
DDX3X-220ENST00000630370 WIZO95785 1651 aa15.93■□□□□ 0.14
DDX3X-220ENST00000630370 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
DDX3X-220ENST00000630370 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
DDX3X-220ENST00000630370 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
DDX3X-220ENST00000630370 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
DDX3X-220ENST00000630370 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
DDX3X-220ENST00000630370 TTBK1Q5TCY1 1321 aaPredicted RBP15.67■□□□□ 0.1
DDX3X-220ENST00000630370 HRCP23327 699 aa15.66■□□□□ 0.1
DDX3X-220ENST00000630370 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
DDX3X-220ENST00000630370 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
DDX3X-220ENST00000630370 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
DDX3X-220ENST00000630370 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
DDX3X-220ENST00000630370 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
DDX3X-220ENST00000630370 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
DDX3X-220ENST00000630370 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
DDX3X-220ENST00000630370 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
DDX3X-220ENST00000630370 ATAD2BQ9ULI0 1458 aa15.42■□□□□ 0.06
DDX3X-220ENST00000630370 SOGA1O94964 1423 aa15.38■□□□□ 0.05
DDX3X-220ENST00000630370 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
DDX3X-220ENST00000630370 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
DDX3X-220ENST00000630370 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.03
DDX3X-220ENST00000630370 EIF4G1Q04637 1599 aaKnown RBP15.26■□□□□ 0.03
DDX3X-220ENST00000630370 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
DDX3X-220ENST00000630370 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
DDX3X-220ENST00000630370 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
DDX3X-220ENST00000630370 PEG3Q9GZU2 1588 aa15.1■□□□□ 0.01
DDX3X-220ENST00000630370 NCAPD3P42695 1498 aa15.07■□□□□ 0
DDX3X-220ENST00000630370 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
DDX3X-220ENST00000630370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
DDX3X-220ENST00000630370 CEP162Q5TB80 1403 aa15.04■□□□□ -0
DDX3X-220ENST00000630370 NESP48681 1621 aa15□□□□□ -0.01
DDX3X-220ENST00000630370 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
DDX3X-220ENST00000630370 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
DDX3X-220ENST00000630370 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
DDX3X-220ENST00000630370 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
DDX3X-220ENST00000630370 APLP2Q06481 763 aa14.93□□□□□ -0.02
DDX3X-220ENST00000630370 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
DDX3X-220ENST00000630370 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
DDX3X-220ENST00000630370 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
DDX3X-220ENST00000630370 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
DDX3X-220ENST00000630370 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
DDX3X-220ENST00000630370 CCER1Q8TC90 406 aaPredicted RBP14.9□□□□□ -0.02
DDX3X-220ENST00000630370 CUX1P39880 1505 aa14.9□□□□□ -0.02
DDX3X-220ENST00000630370 CFTRP13569 1480 aa14.89□□□□□ -0.03
DDX3X-220ENST00000630370 CLIP1P30622 1438 aa14.87□□□□□ -0.03
DDX3X-220ENST00000630370 EEA1Q15075 1411 aa14.85□□□□□ -0.03
DDX3X-220ENST00000630370 CUX2O14529 1486 aa14.84□□□□□ -0.03
DDX3X-220ENST00000630370 ITGAEP38570 1179 aa14.84□□□□□ -0.03
DDX3X-220ENST00000630370 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.03
DDX3X-220ENST00000630370 RAD54L2Q9Y4B4 1467 aa14.81□□□□□ -0.04
DDX3X-220ENST00000630370 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
DDX3X-220ENST00000630370 FANCD2Q9BXW9 1451 aa14.81□□□□□ -0.04
DDX3X-220ENST00000630370 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
DDX3X-220ENST00000630370 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.05
DDX3X-220ENST00000630370 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
DDX3X-220ENST00000630370 ARID3CA6NKF2 412 aa14.75□□□□□ -0.05
DDX3X-220ENST00000630370 KANK4Q5T7N3 995 aaPredicted RBP14.74□□□□□ -0.05
DDX3X-220ENST00000630370 IGF1RP08069 1367 aa14.71□□□□□ -0.06
DDX3X-220ENST00000630370 CARMIL1Q5VZK9 1371 aa14.69□□□□□ -0.06
DDX3X-220ENST00000630370 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
DDX3X-220ENST00000630370 FBLN2P98095 1184 aa14.64□□□□□ -0.07
DDX3X-220ENST00000630370 KIF21BO75037 1637 aa14.63□□□□□ -0.07
DDX3X-220ENST00000630370 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
DDX3X-220ENST00000630370 VPS8Q8N3P4 1428 aa14.62□□□□□ -0.07
DDX3X-220ENST00000630370 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
DDX3X-220ENST00000630370 POLA1P09884 1462 aaPredicted RBP14.61□□□□□ -0.07
DDX3X-220ENST00000630370 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
DDX3X-220ENST00000630370 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.08
DDX3X-220ENST00000630370 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
DDX3X-220ENST00000630370 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
DDX3X-220ENST00000630370 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
DDX3X-220ENST00000630370 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.085e-7■■■■□ 22.7
DDX3X-220ENST00000630370 FHOD3Q2V2M9 1422 aa14.52□□□□□ -0.09
DDX3X-220ENST00000630370 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
DDX3X-220ENST00000630370 AEBP2Q6ZN18 517 aaPredicted RBP14.5□□□□□ -0.09
DDX3X-220ENST00000630370 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
DDX3X-220ENST00000630370 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
DDX3X-220ENST00000630370 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
DDX3X-220ENST00000630370 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms