RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-222ENST00000560494 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
SLTM-222ENST00000560494 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
SLTM-222ENST00000560494 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
SLTM-222ENST00000560494 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
SLTM-222ENST00000560494 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
SLTM-222ENST00000560494 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
SLTM-222ENST00000560494 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
SLTM-222ENST00000560494 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
SLTM-222ENST00000560494 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
SLTM-222ENST00000560494 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
SLTM-222ENST00000560494 NACADO15069 1562 aa23.22■■□□□ 1.31
SLTM-222ENST00000560494 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
SLTM-222ENST00000560494 ABCC9O60706 1549 aa23.12■■□□□ 1.29
SLTM-222ENST00000560494 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
SLTM-222ENST00000560494 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
SLTM-222ENST00000560494 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
SLTM-222ENST00000560494 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
SLTM-222ENST00000560494 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
SLTM-222ENST00000560494 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
SLTM-222ENST00000560494 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
SLTM-222ENST00000560494 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
SLTM-222ENST00000560494 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
SLTM-222ENST00000560494 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
SLTM-222ENST00000560494 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
SLTM-222ENST00000560494 FOXD1Q16676 465 aa21.84■■□□□ 1.09
SLTM-222ENST00000560494 WIZO95785 1651 aa21.82■■□□□ 1.08
SLTM-222ENST00000560494 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
SLTM-222ENST00000560494 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
SLTM-222ENST00000560494 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
SLTM-222ENST00000560494 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
SLTM-222ENST00000560494 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
SLTM-222ENST00000560494 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
SLTM-222ENST00000560494 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
SLTM-222ENST00000560494 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
SLTM-222ENST00000560494 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.02
SLTM-222ENST00000560494 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
SLTM-222ENST00000560494 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
SLTM-222ENST00000560494 ADRA2BP18089 450 aa21.14■□□□□ 0.97
SLTM-222ENST00000560494 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
SLTM-222ENST00000560494 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
SLTM-222ENST00000560494 PRDM2Q13029 1718 aa20.96■□□□□ 0.95
SLTM-222ENST00000560494 EEA1Q15075 1411 aa20.95■□□□□ 0.95
SLTM-222ENST00000560494 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
SLTM-222ENST00000560494 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
SLTM-222ENST00000560494 CFTRP13569 1480 aa20.89■□□□□ 0.94
SLTM-222ENST00000560494 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
SLTM-222ENST00000560494 TOP2BQ02880 1626 aa20.79■□□□□ 0.92
SLTM-222ENST00000560494 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
SLTM-222ENST00000560494 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
SLTM-222ENST00000560494 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
SLTM-222ENST00000560494 LOC105371045A0A1W2PR82 267 aa20.65■□□□□ 0.9
SLTM-222ENST00000560494 PIAS4Q8N2W9 510 aaPredicted RBP20.65■□□□□ 0.9
SLTM-222ENST00000560494 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
SLTM-222ENST00000560494 KIF21BO75037 1637 aa20.57■□□□□ 0.88
SLTM-222ENST00000560494 SOGA1O94964 1423 aa20.57■□□□□ 0.88
SLTM-222ENST00000560494 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
SLTM-222ENST00000560494 CUX1P39880 1505 aa20.56■□□□□ 0.88
SLTM-222ENST00000560494 GOLGA3Q08378 1498 aa20.54■□□□□ 0.88
SLTM-222ENST00000560494 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
SLTM-222ENST00000560494 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
SLTM-222ENST00000560494 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
SLTM-222ENST00000560494 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
SLTM-222ENST00000560494 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
SLTM-222ENST00000560494 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
SLTM-222ENST00000560494 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
SLTM-222ENST00000560494 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
SLTM-222ENST00000560494 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
SLTM-222ENST00000560494 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
SLTM-222ENST00000560494 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
SLTM-222ENST00000560494 NESP48681 1621 aa20.31■□□□□ 0.84
SLTM-222ENST00000560494 PRXQ9BXM0 1461 aa20.3■□□□□ 0.84
SLTM-222ENST00000560494 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
SLTM-222ENST00000560494 ABCA10Q8WWZ4 1543 aa20.25■□□□□ 0.83
SLTM-222ENST00000560494 CUX2O14529 1486 aa20.24■□□□□ 0.83
SLTM-222ENST00000560494 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
SLTM-222ENST00000560494 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
SLTM-222ENST00000560494 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
SLTM-222ENST00000560494 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
SLTM-222ENST00000560494 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
SLTM-222ENST00000560494 CUL7Q14999 1698 aa20.17■□□□□ 0.82
SLTM-222ENST00000560494 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
SLTM-222ENST00000560494 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
SLTM-222ENST00000560494 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
SLTM-222ENST00000560494 CLIP1P30622 1438 aa20.13■□□□□ 0.81
SLTM-222ENST00000560494 IGF1RP08069 1367 aa20.1■□□□□ 0.81
SLTM-222ENST00000560494 MSH5O43196 834 aa20.09■□□□□ 0.81
SLTM-222ENST00000560494 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
SLTM-222ENST00000560494 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
SLTM-222ENST00000560494 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
SLTM-222ENST00000560494 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
SLTM-222ENST00000560494 WDR62O43379 1518 aa20.03■□□□□ 0.8
SLTM-222ENST00000560494 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
SLTM-222ENST00000560494 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
SLTM-222ENST00000560494 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
SLTM-222ENST00000560494 GAPVD1Q14C86 1478 aa19.97■□□□□ 0.79
SLTM-222ENST00000560494 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
SLTM-222ENST00000560494 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
SLTM-222ENST00000560494 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
SLTM-222ENST00000560494 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
SLTM-222ENST00000560494 APLP2Q06481 763 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms