RNA–Protein interactions for RNA: ENST00000625837.2

DDX3X-215, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5 BASIC

Gene DDX3X, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-215ENST00000625837 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
DDX3X-215ENST00000625837 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
DDX3X-215ENST00000625837 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
DDX3X-215ENST00000625837 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
DDX3X-215ENST00000625837 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
DDX3X-215ENST00000625837 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
DDX3X-215ENST00000625837 ABCC9O60706 1549 aa18.32■□□□□ 0.52
DDX3X-215ENST00000625837 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
DDX3X-215ENST00000625837 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
DDX3X-215ENST00000625837 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
DDX3X-215ENST00000625837 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
DDX3X-215ENST00000625837 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■■□□□ 14.4
DDX3X-215ENST00000625837 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
DDX3X-215ENST00000625837 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
DDX3X-215ENST00000625837 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
DDX3X-215ENST00000625837 NACADO15069 1562 aa17.47■□□□□ 0.39
DDX3X-215ENST00000625837 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
DDX3X-215ENST00000625837 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
DDX3X-215ENST00000625837 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
DDX3X-215ENST00000625837 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
DDX3X-215ENST00000625837 MROH2BQ7Z745 1585 aa17.26■□□□□ 0.35
DDX3X-215ENST00000625837 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
DDX3X-215ENST00000625837 WIZO95785 1651 aa17.12■□□□□ 0.33
DDX3X-215ENST00000625837 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
DDX3X-215ENST00000625837 TTBK1Q5TCY1 1321 aaPredicted RBP16.99■□□□□ 0.31
DDX3X-215ENST00000625837 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
DDX3X-215ENST00000625837 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
DDX3X-215ENST00000625837 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.29
DDX3X-215ENST00000625837 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
DDX3X-215ENST00000625837 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.28
DDX3X-215ENST00000625837 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
DDX3X-215ENST00000625837 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
DDX3X-215ENST00000625837 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
DDX3X-215ENST00000625837 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
DDX3X-215ENST00000625837 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
DDX3X-215ENST00000625837 TRIM26Q12899 539 aaPredicted RBP16.64■□□□□ 0.25
DDX3X-215ENST00000625837 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
DDX3X-215ENST00000625837 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
DDX3X-215ENST00000625837 SOGA1O94964 1423 aa16.61■□□□□ 0.25
DDX3X-215ENST00000625837 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
DDX3X-215ENST00000625837 HRCP23327 699 aa16.58■□□□□ 0.24
DDX3X-215ENST00000625837 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
DDX3X-215ENST00000625837 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
DDX3X-215ENST00000625837 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
DDX3X-215ENST00000625837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
DDX3X-215ENST00000625837 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
DDX3X-215ENST00000625837 APLP2Q06481 763 aa16.34■□□□□ 0.21
DDX3X-215ENST00000625837 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
DDX3X-215ENST00000625837 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
DDX3X-215ENST00000625837 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
DDX3X-215ENST00000625837 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
DDX3X-215ENST00000625837 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
DDX3X-215ENST00000625837 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
DDX3X-215ENST00000625837 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
DDX3X-215ENST00000625837 P3H3Q8IVL6 736 aa16.21■□□□□ 0.18
DDX3X-215ENST00000625837 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
DDX3X-215ENST00000625837 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
DDX3X-215ENST00000625837 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
DDX3X-215ENST00000625837 EEA1Q15075 1411 aa16.15■□□□□ 0.18
DDX3X-215ENST00000625837 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
DDX3X-215ENST00000625837 CLIP1P30622 1438 aa16.13■□□□□ 0.17
DDX3X-215ENST00000625837 ITGAEP38570 1179 aa16.13■□□□□ 0.17
DDX3X-215ENST00000625837 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
DDX3X-215ENST00000625837 NESP48681 1621 aa16.1■□□□□ 0.17
DDX3X-215ENST00000625837 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
DDX3X-215ENST00000625837 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
DDX3X-215ENST00000625837 CFTRP13569 1480 aa16.06■□□□□ 0.16
DDX3X-215ENST00000625837 CUX2O14529 1486 aa16.05■□□□□ 0.16
DDX3X-215ENST00000625837 CUX1P39880 1505 aa16.04■□□□□ 0.16
DDX3X-215ENST00000625837 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
DDX3X-215ENST00000625837 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
DDX3X-215ENST00000625837 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
DDX3X-215ENST00000625837 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
DDX3X-215ENST00000625837 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
DDX3X-215ENST00000625837 ARID3CA6NKF2 412 aa15.94■□□□□ 0.14
DDX3X-215ENST00000625837 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
DDX3X-215ENST00000625837 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
DDX3X-215ENST00000625837 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
DDX3X-215ENST00000625837 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
DDX3X-215ENST00000625837 IGF1RP08069 1367 aa15.89■□□□□ 0.13
DDX3X-215ENST00000625837 FBLN2P98095 1184 aa15.86■□□□□ 0.13
DDX3X-215ENST00000625837 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
DDX3X-215ENST00000625837 FAM50AQ14320 339 aaKnown RBP15.83■□□□□ 0.12
DDX3X-215ENST00000625837 KIF21BO75037 1637 aa15.82■□□□□ 0.12
DDX3X-215ENST00000625837 PRXQ9BXM0 1461 aa15.82■□□□□ 0.12
DDX3X-215ENST00000625837 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
DDX3X-215ENST00000625837 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
DDX3X-215ENST00000625837 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
DDX3X-215ENST00000625837 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
DDX3X-215ENST00000625837 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
DDX3X-215ENST00000625837 FHOD3Q2V2M9 1422 aa15.69■□□□□ 0.1
DDX3X-215ENST00000625837 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
DDX3X-215ENST00000625837 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
DDX3X-215ENST00000625837 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.15e-7■■■■□ 22.7
DDX3X-215ENST00000625837 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
DDX3X-215ENST00000625837 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
DDX3X-215ENST00000625837 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
DDX3X-215ENST00000625837 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
DDX3X-215ENST00000625837 DIEXFQ68CQ4 756 aaKnown RBP15.61■□□□□ 0.09
DDX3X-215ENST00000625837 NEUROD1Q13562 356 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms