RNA–Protein interactions for RNA: ENST00000478993.5

DDX3X-204, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 1 (best)

Gene DDX3X, Length 3,397 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-204ENST00000478993 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
DDX3X-204ENST00000478993 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
DDX3X-204ENST00000478993 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
DDX3X-204ENST00000478993 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
DDX3X-204ENST00000478993 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
DDX3X-204ENST00000478993 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
DDX3X-204ENST00000478993 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
DDX3X-204ENST00000478993 SHROOM4Q9ULL8 1493 aa16.25■□□□□ 0.19
DDX3X-204ENST00000478993 HRCP23327 699 aa16.16■□□□□ 0.18
DDX3X-204ENST00000478993 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
DDX3X-204ENST00000478993 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
DDX3X-204ENST00000478993 ABCC9O60706 1549 aa15.98■□□□□ 0.15
DDX3X-204ENST00000478993 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
DDX3X-204ENST00000478993 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
DDX3X-204ENST00000478993 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
DDX3X-204ENST00000478993 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
DDX3X-204ENST00000478993 PPARGC1BQ86YN6 1023 aaKnown RBP15.52■□□□□ 0.07
DDX3X-204ENST00000478993 TRIM26Q12899 539 aaPredicted RBP15.5■□□□□ 0.07
DDX3X-204ENST00000478993 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
DDX3X-204ENST00000478993 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
DDX3X-204ENST00000478993 NACADO15069 1562 aa15.35■□□□□ 0.05
DDX3X-204ENST00000478993 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
DDX3X-204ENST00000478993 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
DDX3X-204ENST00000478993 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
DDX3X-204ENST00000478993 WIZO95785 1651 aa15.23■□□□□ 0.03
DDX3X-204ENST00000478993 PELP1Q8IZL8 1130 aaKnown RBP15.18■□□□□ 0.02
DDX3X-204ENST00000478993 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
DDX3X-204ENST00000478993 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
DDX3X-204ENST00000478993 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
DDX3X-204ENST00000478993 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0.01
DDX3X-204ENST00000478993 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
DDX3X-204ENST00000478993 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
DDX3X-204ENST00000478993 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
DDX3X-204ENST00000478993 TRIM41Q8WV44 630 aa15.02□□□□□ -0.01
DDX3X-204ENST00000478993 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
DDX3X-204ENST00000478993 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
DDX3X-204ENST00000478993 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
DDX3X-204ENST00000478993 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
DDX3X-204ENST00000478993 EEA1Q15075 1411 aa14.85□□□□□ -0.03
DDX3X-204ENST00000478993 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
DDX3X-204ENST00000478993 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
DDX3X-204ENST00000478993 KIF21BO75037 1637 aa14.82□□□□□ -0.04
DDX3X-204ENST00000478993 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
DDX3X-204ENST00000478993 MYT1Q01538 1121 aa14.77□□□□□ -0.04
DDX3X-204ENST00000478993 CEP162Q5TB80 1403 aa14.77□□□□□ -0.04
DDX3X-204ENST00000478993 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
DDX3X-204ENST00000478993 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
DDX3X-204ENST00000478993 SOGA1O94964 1423 aa14.69□□□□□ -0.06
DDX3X-204ENST00000478993 NEUROD1Q13562 356 aa14.67□□□□□ -0.06
DDX3X-204ENST00000478993 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
DDX3X-204ENST00000478993 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
DDX3X-204ENST00000478993 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
DDX3X-204ENST00000478993 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
DDX3X-204ENST00000478993 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
DDX3X-204ENST00000478993 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
DDX3X-204ENST00000478993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
DDX3X-204ENST00000478993 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
DDX3X-204ENST00000478993 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
DDX3X-204ENST00000478993 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
DDX3X-204ENST00000478993 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
DDX3X-204ENST00000478993 CUX2O14529 1486 aa14.51□□□□□ -0.09
DDX3X-204ENST00000478993 ERICH3Q5RHP9 1530 aa14.5□□□□□ -0.09
DDX3X-204ENST00000478993 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
DDX3X-204ENST00000478993 CCER1Q8TC90 406 aaPredicted RBP14.48□□□□□ -0.09
DDX3X-204ENST00000478993 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
DDX3X-204ENST00000478993 CLIP1P30622 1438 aa14.46□□□□□ -0.09
DDX3X-204ENST00000478993 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
DDX3X-204ENST00000478993 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
DDX3X-204ENST00000478993 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
DDX3X-204ENST00000478993 PRDM2Q13029 1718 aa14.4□□□□□ -0.1
DDX3X-204ENST00000478993 CLSPNQ9HAW4 1339 aa14.4□□□□□ -0.1
DDX3X-204ENST00000478993 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
DDX3X-204ENST00000478993 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
DDX3X-204ENST00000478993 RAPGEF2Q9Y4G8 1499 aa14.37□□□□□ -0.11
DDX3X-204ENST00000478993 ADRA2BP18089 450 aa14.36□□□□□ -0.11
DDX3X-204ENST00000478993 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
DDX3X-204ENST00000478993 RRBP1Q9P2E9 1410 aaKnown RBP14.35□□□□□ -0.11
DDX3X-204ENST00000478993 MAP3K1Q13233 1512 aa14.3□□□□□ -0.12
DDX3X-204ENST00000478993 KCNA4P22459 653 aa14.29□□□□□ -0.12
DDX3X-204ENST00000478993 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
DDX3X-204ENST00000478993 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
DDX3X-204ENST00000478993 MIER1Q8N108 512 aa14.24□□□□□ -0.13
DDX3X-204ENST00000478993 CUX1P39880 1505 aa14.21□□□□□ -0.13
DDX3X-204ENST00000478993 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
DDX3X-204ENST00000478993 CFAP43Q8NDM7 1665 aa14.18□□□□□ -0.14
DDX3X-204ENST00000478993 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
DDX3X-204ENST00000478993 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
DDX3X-204ENST00000478993 TIAM1Q13009 1591 aa14.11□□□□□ -0.15
DDX3X-204ENST00000478993 CFTRP13569 1480 aa14.1□□□□□ -0.15
DDX3X-204ENST00000478993 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
DDX3X-204ENST00000478993 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
DDX3X-204ENST00000478993 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
DDX3X-204ENST00000478993 SUPT16HQ9Y5B9 1047 aaKnown RBP14□□□□□ -0.17
DDX3X-204ENST00000478993 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
DDX3X-204ENST00000478993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.172e-8■■□□□ 11.4
DDX3X-204ENST00000478993 CCNB3Q8WWL7 1395 aa13.98□□□□□ -0.17
DDX3X-204ENST00000478993 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
DDX3X-204ENST00000478993 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
DDX3X-204ENST00000478993 LRRC9Q6ZRR7 1453 aa13.96□□□□□ -0.18
DDX3X-204ENST00000478993 LRRIQ1Q96JM4 1722 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms